Damiano Piovesan
Damiano Piovesan
Assistant professor at University of Padua
Adresse e-mail validée de unipd.it - Page d'accueil
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The Pfam protein families database in 2019
S El-Gebali, J Mistry, A Bateman, SR Eddy, A Luciani, SC Potter, ...
Nucleic acids research 47 (D1), D427-D432, 2019
26452019
InterPro in 2017—beyond protein family and domain annotations
RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ...
Nucleic acids research 45 (D1), D190-D199, 2017
12472017
A large-scale evaluation of computational protein function prediction
P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ...
Nature methods 10 (3), 221-227, 2013
8322013
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
3052016
The RING 2.0 web server for high quality residue interaction networks
D Piovesan, G Minervini, SCE Tosatto
Nucleic acids research 44 (W1), W367-W374, 2016
2762016
DisProt 7.0: a major update of the database of disordered proteins
D Piovesan, F Tabaro, I Mičetić, M Necci, F Quaglia, CJ Oldfield, ...
Nucleic acids research 45 (D1), D219-D227, 2017
2452017
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins
D Piovesan, F Tabaro, L Paladin, M Necci, I Mičetić, C Camilloni, N Davey, ...
Nucleic acids research 46 (D1), D471-D476, 2018
1632018
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
1462019
DisProt: intrinsic protein disorder annotation in 2020
A Hatos, B Hajdu-Soltész, AM Monzon, N Palopoli, L Álvarez, ...
Nucleic acids research 48 (D1), D269-D276, 2020
1162020
MobiDB-lite: fast and highly specific consensus prediction of intrinsic disorder in proteins
M Necci, D Piovesan, Z Dosztányi, SCE Tosatto
Bioinformatics 33 (9), 1402-1404, 2017
1062017
Simultaneous quantification of protein order and disorder
P Sormanni, D Piovesan, GT Heller, M Bonomi, P Kukic, C Camilloni, ...
Nature chemical biology 13 (4), 339-342, 2017
942017
INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity
D Piovesan, M Giollo, E Leonardi, C Ferrari, SCE Tosatto
Nucleic acids research 43 (W1), W134-W140, 2015
702015
RepeatsDB: a database of tandem repeat protein structures
T Di Domenico, E Potenza, I Walsh, R Gonzalo Parra, M Giollo, ...
Nucleic acids research 42 (D1), D352-D357, 2014
582014
FFPred 2.0: improved homology-independent prediction of gene ontology terms for eukaryotic protein sequences
F Minneci, D Piovesan, D Cozzetto, DT Jones
PLoS One 8 (5), e63754, 2013
582013
A comprehensive assessment of long intrinsic protein disorder from the DisProt database
M Necci, D Piovesan, Z Dosztányi, P Tompa, SCE Tosatto
Bioinformatics 34 (3), 445-452, 2018
492018
FELLS: fast estimator of latent local structure
D Piovesan, I Walsh, G Minervini, SCE Tosatto
Bioinformatics 33 (12), 1889-1891, 2017
472017
The human "magnesome": detecting magnesium binding sites on human proteins
D Piovesan, G Profiti, PL Martelli, R Casadio
BMC bioinformatics 13 (Suppl 14), S10, 2012
41*2012
RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures
L Paladin, L Hirsh, D Piovesan, MA Andrade-Navarro, AV Kajava, ...
Nucleic acids research 45 (D1), D308-D312, 2017
372017
Large‐scale analysis of intrinsic disorder flavors and associated functions in the protein sequence universe
M Necci, D Piovesan, SCE Tosatto
Protein Science 25 (12), 2164-2174, 2016
352016
BAR-PLUS: the Bologna Annotation Resource Plus for functional and structural annotation of protein sequences
D Piovesan, P Luigi Martelli, P Fariselli, A Zauli, I Rossi, R Casadio
Nucleic acids research 39 (suppl_2), W197-W202, 2011
342011
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