Jimmy Vandel
Jimmy Vandel
Université de Lille
Verified email at univ-lille.fr
Title
Cited by
Cited by
Year
Gene regulatory network reconstruction using Bayesian networks, the Dantzig Selector, the Lasso and their meta-analysis
M Vignes, J Vandel, D Allouche, N Ramadan-Alban, C Cierco-Ayrolles, ...
PloS one 6 (12), e29165, 2011
1162011
Probing instructions for expression regulation in gene nucleotide compositions
C Bessière, M Taha, F Petitprez, J Vandel, JM Marin, L Bréhélin, S Lèbre, ...
PLoS computational biology 14 (1), e1005921, 2018
112018
A panel of learning methods for the reconstruction of gene regulatory networks in a systems genetics context
D Allouche, C Cierco-Ayrolles, S De Givry, G Guillermin, B Mangin, ...
Gene Network Inference, 9-31, 2013
112013
Probing transcription factor combinatorics in different promoter classes and in enhancers
J Vandel, O Cassan, S Lèbre, CH Lecellier, L Bréhélin
BMC genomics 20 (1), 1-19, 2019
92019
Hepatic molecular signatures highlight the sexual dimorphism of Non‐Alcoholic SteatoHepatitis (NASH)
J Vandel, J Dubois‐Chevalier, C Gheeraert, B Derudas, V Raverdy, ...
Hepatology, 2020
82020
New local move operators for Bayesian networks structure learning
J Vandel, B Mangin, S De Givry
The Sixth European Workshop on Probabilistic Graphical Models, 8, 2012
62012
SAGA: Sparse And Geometry-Aware non-negative matrix factorization through non-linear local embedding
N Courty, X Gong, J Vandel, T Burger
Machine learning 97 (1-2), 205-226, 2014
42014
Extended Bayesian scores for reconstructing gene regulatory networks
J Vandel, B Mangin, M Vignes, S de Givry
ECCS-10 workshop on graphical models for reasoning on biological systems …, 2010
42010
Reconstruction quality of a biological network when its constituting elements are partially observed
V Picheny, J Vandel, M Vignes, N Villa-Vialaneix
Seventeenth International Conference on Artificial Intelligence and …, 2014
32014
Inférence de réseaux de régulation de gènes au travers de scores étendus dans les réseaux Bayésiens.
J Vandel, B Mangin, M Vignes, D Leroux, O Loudet, ML Martin-Magniette, ...
Revue d'intelligence artificielle 26 (6), 679-708, 2012
12012
Reconstruction de réseau de régulation de gène à l’aide de données génomiques et de données génétiques
J Vandel, S de Givry, B Mangin, M Vignes
Conférence d'Apprentissage Automatique (CAP 2010), 12 p., 2010
12010
Inférence de réseaux de régulation de genesa partir de données d’expression et de polymorphisme
J Vandel, S de Givry
JOBIM-09 workshop sur Modeles graphiques probabilistes pour l’intégration de …, 2009
12009
GIANT: Galaxy-based tool for Interactive ANalysis of Transcriptomic data
J Vandel, C Gheeraert, B Staels, J Eeckhoute, P Lefebvre, ...
Scientific reports 10 (1), 1-13, 2020
2020
Modélisation de l'expression des gènes à partir de données de séquence ADN
M Taha, C Bessière, F Petitprez, J Vandel, JM Marin, L Brehelin, S Lébre, ...
JdS 2017, 49èmes Journées de Statistique de la SFdS, 2017
2017
Gene nucleotide composition accurately predicts expression and is linked to topological chromatin domains
C Bessière, M Taha, F Petitprez, J Vandel, JM Marin, L Bréhélin, S Lèbre, ...
bioRxiv, 117499, 2017
2017
Modeling transcription factor combinatorics in promoters and enhancers
J Vandel, O Cassan, S Lèbre, CH Lecellier, L Brehelin
bioRxiv, 197418, 2017
2017
A panel of learning methods for the reconstruction of gene regulatory networks in a systems genetics
D Allouche, C Cierco-Ayrolles, S de Givry, G Guillermin, B Mangin, ...
Gene network inference, verification of methods for systems genetics data …, 2013
2013
Apprentissage de la structure de réseaux bayésiens. Application aux données de génétique-génomique
J Vandel
Université Toulouse III-Paul Sabatier, 2012
2012
Inferring gene regulatory networks from genetical genomics data
VA Huynh-Thu, J Vandel, A Irrthum, L Wehenkel, P Geurts
2012
A New Local Move Operator for Reconstructing Gene Regulatory Networks
J Vandel, S de Givry
Alessandro Dal Palu, Agostino Dovier, Andrea Formisano, 67, 2011
2011
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Articles 1–20