| Gene regulatory network reconstruction using Bayesian networks, the Dantzig Selector, the Lasso and their meta-analysis M Vignes, J Vandel, D Allouche, N Ramadan-Alban, C Cierco-Ayrolles, ... PloS one 6 (12), e29165, 2011 | 112 | 2011 |
| A panel of learning methods for the reconstruction of gene regulatory networks in a systems genetics context D Allouche, C Cierco-Ayrolles, S De Givry, G Guillermin, B Mangin, ... Gene Network Inference, 9-31, 2013 | 11 | 2013 |
| Probing instructions for expression regulation in gene nucleotide compositions C Bessière, M Taha, F Petitprez, J Vandel, JM Marin, L Brehelin, S Lèbre, ... PLoS computational biology 14 (1), e1005921, 2018 | 10 | 2018 |
| Probing transcription factor combinatorics in different promoter classes and in enhancers J Vandel, O Cassan, S Lèbre, CH Lecellier, L Bréhélin BMC genomics 20 (1), 1-19, 2019 | 7 | 2019 |
| New local move operators for Bayesian networks structure learning J Vandel, B Mangin, S De Givry The Sixth European Workshop on Probabilistic Graphical Models, 8, 2012 | 6 | 2012 |
| Hepatic molecular signatures highlight the sexual dimorphism of Non‐Alcoholic SteatoHepatitis (NASH) J Vandel, J Dubois‐Chevalier, C Gheeraert, B Derudas, V Raverdy, ... Hepatology, 2020 | 4 | 2020 |
| SAGA: Sparse And Geometry-Aware non-negative matrix factorization through non-linear local embedding N Courty, X Gong, J Vandel, T Burger Machine learning 97 (1-2), 205-226, 2014 | 4 | 2014 |
| Extended Bayesian scores for reconstructing gene regulatory networks J Vandel, B Mangin, M Vignes, S de Givry ECCS-10 workshop on graphical models for reasoning on biological systems …, 2010 | 4 | 2010 |
| Reconstruction quality of a biological network when its constituting elements are partially observed V Picheny, J Vandel, M Vignes, N Villa-Vialaneix | 3 | 2014 |
| Inférence de réseaux de régulation de gènes au travers de scores étendus dans les réseaux Bayésiens. J Vandel, B Mangin, M Vignes, D Leroux, O Loudet, ML Martin-Magniette, ... Revue d'intelligence artificielle 26 (6), 679-708, 2012 | 1 | 2012 |
| Reconstruction de réseau de régulation de gène à l’aide de données génomiques et de données génétiques J Vandel, S de Givry, B Mangin, M Vignes Conférence d'Apprentissage Automatique (CAP 2010), 12 p., 2010 | 1 | 2010 |
| Inférence de réseaux de régulation de genesa partir de données d’expression et de polymorphisme J Vandel, S de Givry JOBIM-09 workshop sur Modeles graphiques probabilistes pour l’intégration de …, 2009 | 1 | 2009 |
| GIANT: Galaxy-based tool for Interactive ANalysis of Transcriptomic data J Vandel, C Gheeraert, B Staels, J Eeckhoute, P Lefebvre, ... Scientific reports 10 (1), 1-13, 2020 | | 2020 |
| Modélisation de l'expression des gènes à partir de données de séquence ADN M Taha, C Bessière, F Petitprez, J Vandel, JM Marin, L Brehelin, S Lébre, ... | | 2017 |
| Gene nucleotide composition accurately predicts expression and is linked to topological chromatin domains C Bessière, M Taha, F Petitprez, J Vandel, JM Marin, L Bréhélin, S Lèbre, ... bioRxiv, 117499, 2017 | | 2017 |
| Modeling transcription factor combinatorics in promoters and enhancers J Vandel, O Cassan, S Lèbre, CH Lecellier, L Brehelin bioRxiv, 197418, 2017 | | 2017 |
| A panel of learning methods for the reconstruction of gene regulatory networks in a systems genetics D Allouche, C Cierco-Ayrolles, S de Givry, G Guillermin, B Mangin, ... Gene network inference, verification of methods for systems genetics data …, 2013 | | 2013 |
| Apprentissage de la structure de réseaux bayésiens. Application aux données de génétique-génomique J Vandel Université Toulouse III-Paul Sabatier, 2012 | | 2012 |
| Inferring gene regulatory networks from genetical genomics data VA Huynh-Thu, J Vandel, A Irrthum, L Wehenkel, P Geurts | | 2012 |
| A New Local Move Operator for Reconstructing Gene Regulatory Networks J Vandel, S de Givry Alessandro Dal Palu, Agostino Dovier, Andrea Formisano, 67, 2011 | | 2011 |
