Pieter Meysman
Pieter Meysman
Associate professor, University of Antwerp
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A primer to frequent itemset mining for bioinformatics
S Naulaerts, P Meysman, W Bittremieux, TN Vu, WV Berghe, B Goethals, ...
Briefings in bioinformatics 16 (2), 216-231, 2015
Detection of Enriched T Cell Epitope Specificity in Full T Cell Receptor Sequence Repertoires
S Gielis, P Moris, W Bittremieux, N De Neuter, B Ogunjimi, K Laukens, ...
Frontiers in Immunology 10, 2820, 2019
Plasma donor-derived cell-free DNA kinetics after kidney transplantation using a single tube multiplex PCR assay
EM Gielis, C Beirnaert, A Dendooven, P Meysman, K Laukens, ...
PloS one 13 (12), e0208207, 2018
Current challenges for unseen-epitope TCR interaction prediction and a new perspective derived from image classification
P Moris, J De Pauw, A Postovskaya, S Gielis, N De Neuter, W Bittremieux, ...
Briefings in Bioinformatics, 2020
Fast open modification spectral library searching through approximate nearest neighbor indexing
W Bittremieux, P Meysman, WS Noble, K Laukens
Journal of proteome research 17 (10), 3463-3474, 2018
The use of plasma donor-derived, cell-free DNA to monitor acute rejection after kidney transplantation
EM Gielis, KJ Ledeganck, A Dendooven, P Meysman, C Beirnaert, ...
Nephrology Dialysis Transplantation, 2019
On the feasibility of mining CD8+ T cell receptor patterns underlying immunogenic peptide recognition
N De Neuter, W Bittremieux, C Beirnaert, B Cuypers, A Mrzic, P Moris, ...
Immunogenetics 70 (3), 159-168, 2018
COLOMBOS v3. 0: leveraging gene expression compendia for cross-species analyses
M Moretto, P Sonego, N Dierckxsens, M Brilli, L Bianco, ...
Nucleic acids research 44 (D1), D620-D623, 2016
On the viability of unsupervised T-cell receptor sequence clustering for epitope preference
P Meysman, N De Neuter, S Gielis, D Bui Thi, B Ogunjimi, K Laukens
Bioinformatics 35 (9), 1461-1468, 2019
Use of structural DNA properties for the prediction of transcription-factor binding sites in Escherichia coli
P Meysman, TH Dang, K Laukens, R De Smet, Y Wu, K Marchal, ...
Nucleic Acids Research 39 (2), e6-e6, 2011
Grasping frequent subgraph mining for bioinformatics applications
A Mrzic, P Meysman, W Bittremieux, P Moris, B Cule, B Goethals, ...
BioData mining 11 (1), 1-24, 2018
Transcriptome profiling in blood before and after hepatitis B vaccination shows significant differences in gene expression between responders and non-responders
E Bartholomeus, N De Neuter, P Meysman, A Suls, N Keersmaekers, ...
Vaccine 36 (42), 6282-6289, 2018
speaq 2.0: a complete workflow for high-throughput 1D NMR spectra processing and quantification
C Beirnaert, P Meysman, TN Vu, N Hermans, S Apers, L Pieters, A Covaci, ...
PLoS computational biology 14 (3), e1006018, 2018
COLOMBOS v2. 0: an ever expanding collection of bacterial expression compendia
P Meysman, P Sonego, L Bianco, Q Fu, D Ledezma-Tejeida, ...
Nucleic acids research 42 (D1), D649-D653, 2014
Soft skills: an important asset acquired from organizing regional student group activities
J de Ridder, P Meysman, O Oluwagbemi, T Abeel
PLoS Computational Biology 10 (7), e1003708, 2014
MESSAR: Automated recommendation of metabolite substructures from tandem mass spectra
Y Liu, A Mrzic, P Meysman, T De Vijlder, EP Romijn, D Valkenborg, ...
PloS one 15 (1), e0226770, 2020
Multidisciplinary study of the secondary immune response in grandparents re-exposed to chickenpox
B Ogunjimi, J Van den Bergh, P Meysman, S Heynderickx, K Bergs, ...
Scientific Reports 7 (1), 1077, 2017
Expression divergence between Escherichia coli and Salmonella enterica serovar Typhimurium reflects their lifestyles
P Meysman, A Sánchez-Rodríguez, Q Fu, K Marchal, K Engelen
Molecular biology and evolution 30 (6), 1302-1314, 2013
Integrated genomic and metabolomic profiling of ISC1, an emerging Leishmania donovani population in the Indian subcontinent
B Cuypers, M Berg, H Imamura, F Dumetz, G De Muylder, ...
Infection, Genetics and Evolution 62, 170-178, 2018
Structural properties of prokaryotic promoter regions correlate with functional features
P Meysman, J Collado-Vides, E Morett, R Viola, K Engelen, K Laukens
PloS ONE 9 (2), e88717, 2014
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