Alicia Oshlack
TitreCitée parAnnée
A scaling normalization method for differential expression analysis of RNA-seq data
MD Robinson, A Oshlack
Genome biology 11 (3), R25, 2010
26082010
Gene ontology analysis for RNA-seq: accounting for selection bias
MD Young, MJ Wakefield, GK Smyth, A Oshlack
Genome biology 11 (2), R14, 2010
16972010
A comparison of background correction methods for two-colour microarrays
ME Ritchie, J Silver, A Oshlack, M Holmes, D Diyagama, A Holloway, ...
Bioinformatics 23 (20), 2700-2707, 2007
8902007
From RNA-seq reads to differential expression results
A Oshlack, MD Robinson, MD Young
Genome biology 11 (12), 220, 2010
6122010
Transcript length bias in RNA-seq data confounds systems biology
A Oshlack, MJ Wakefield
Biology direct 4 (1), 14, 2009
4562009
SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips
J Maksimovic, L Gordon, A Oshlack
Genome biology 13 (6), R44, 2012
4542012
Expression profiling in primates reveals a rapid evolution of human transcription factors
Y Gilad, A Oshlack, GK Smyth, TP Speed, KP White
Nature 440 (7081), 242, 2006
3202006
Array-based gene discovery with three unrelated subjects shows SCARB2/LIMP-2 deficiency causes myoclonus epilepsy and glomerulosclerosis
SF Berkovic, LM Dibbens, A Oshlack, JD Silver, M Katerelos, DF Vears, ...
The American Journal of Human Genetics 82 (3), 673-684, 2008
2252008
ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity
MD Young, TA Willson, MJ Wakefield, E Trounson, DJ Hilton, ME Blewitt, ...
Nucleic acids research 39 (17), 7415-7427, 2011
2002011
Natural selection on gene expression
Y Gilad, A Oshlack, SA Rifkin
TRENDS in Genetics 22 (8), 456-461, 2006
1642006
Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips
W Shi, A Oshlack, GK Smyth
Nucleic acids research 38 (22), e204-e204, 2010
1582010
Gene regulation in primates evolves under tissue-specific selection pressures
R Blekhman, A Oshlack, AE Chabot, GK Smyth, Y Gilad
PLoS genetics 4 (11), e1000271, 2008
1242008
Identification of recurrent FGFR3 fusion genes in lung cancer through kinome‐centred RNA sequencing
IJ Majewski, L Mittempergher, NM Davidson, A Bosma, SM Willems, ...
The Journal of pathology 230 (3), 270-276, 2013
1082013
Corset: enabling differential gene expression analysis for de novo assembled transcriptomes
NM Davidson, A Oshlack
Genome biology 15 (7), 410, 2014
1062014
A prospective evaluation of whole-exome sequencing as a first-tier molecular test in infants with suspected monogenic disorders
Z Stark, TY Tan, B Chong, GR Brett, P Yap, M Walsh, A Yeung, H Peters, ...
Genetics in Medicine 18 (11), 1090, 2016
1052016
Bpipe: a tool for running and managing bioinformatics pipelines
SP Sadedin, B Pope, A Oshlack
Bioinformatics 28 (11), 1525-1526, 2012
972012
missMethyl: an R package for analyzing data from Illumina’s HumanMethylation450 platform
B Phipson, J Maksimovic, A Oshlack
Bioinformatics 32 (2), 286-288, 2015
782015
Using DNA microarrays to study gene expression in closely related species
A Oshlack, AE Chabot, GK Smyth, Y Gilad
Bioinformatics 23 (10), 1235-1242, 2007
782007
Black Hole Mass Estimates of Radio-selected Quasars
A Oshlack, RL Webster, MT Whiting
The Astrophysical Journal 576 (1), 81, 2002
762002
Normalization of boutique two-color microarrays with a high proportion of differentially expressed probes
A Oshlack, D Emslie, LM Corcoran, GK Smyth
Genome biology 8 (1), R2, 2007
702007
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