Jerome Chopard
Jerome Chopard
Research associate
Adresse e-mail validée de polytechnique.org
TitreCitée parAnnée
Flux-based transport enhancement as a plausible unifying mechanism for auxin transport in meristem development
S Stoma, M Lucas, J Chopard, M Schaedel, J Traas, C Godin
PLoS computational biology 4 (10), e1000207, 2008
1572008
PlantGL: a Python-based geometric library for 3D plant modelling at different scales
C Pradal, F Boudon, C Nouguier, J Chopard, C Godin
Graphical models 71 (1), 1-21, 2009
1172009
A Computational Framework for 3D Mechanical Modeling of Plant Morphogenesis with Cellular Resolution
F Boudon, J Chopard, O Ali, B Gilles, O Hamant, A Boudaoud, J Traas, ...
PLoS computational biology 11 (1), e1003950, 2015
862015
Auxin carriers localization drives auxin accumulation in plant cells infected by Frankia in Casuarina glauca actinorhizal nodules
F Perrine-Walker, P Doumas, M Lucas, V Vaissayre, NJ Beauchemin, ...
Plant physiology 154 (3), 1372-1380, 2010
782010
Integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots
D Muraro, N Mellor, MP Pound, M Lucas, J Chopard, HM Byrne, C Godin, ...
Proceedings of the National Academy of Sciences 111 (2), 857-862, 2014
672014
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities
S Cohen-Boulakia, K Belhajjame, O Collin, J Chopard, C Froidevaux, ...
Future Generation Computer Systems, 2017
522017
Modelling foliage characteristics in 3D tree crowns: influence on light interception and leaf irradiance
CE Parveaud, J Chopard, J Dauzat, B Courbaud, D Auclair
Trees 22 (1), 87-104, 2008
352008
A data-driven integrative model of sepal primordium polarity in Arabidopsis
C La Rota, J Chopard, P Das, S Paindavoine, F Rozier, E Farcot, C Godin, ...
The Plant cell 23 (12), 4318-4333, 2011
302011
InfraPhenoGrid: A scientific workflow infrastructure for Plant Phenomics on the Grid
C Pradal, S Artzet, J Chopard, D Dupuis, C Fournier, M Mielewczik, ...
Future Generation Computer Systems 67, 341-353, 2017
192017
Spatio‐temporal water dynamics in mature Banksia menziesii trees during drought
MKF Bader, W Ehrenberger, R Bitter, J Stevens, BP Miller, J Chopard, ...
Physiologia plantarum 152 (2), 301-315, 2014
132014
Using mechanics in the modelling of meristem morphogenesis
S Stoma, J Chopard, C Godin, J Traas
5th International Workshop on Functional-Structural Plant Models 52, 1-4, 2007
102007
A multi-scale model of the interplay between cell signalling and hormone transport in specifying the root meristem of Arabidopsis thaliana
D Muraro, A Larrieu, M Lucas, J Chopard, H Byrne, C Godin, J King
Journal of theoretical biology 404, 182-205, 2016
62016
A general spatially-explicit model to inform rapid response to new biological invasions: why do we need one and what should it look like
M Renton, D Savage, J Chopard, F Chan, D Marinova, RS Anderssen
MODSIM2011, 19th International Congress on Modelling and Simulation …, 2011
52011
Towards a formal expression of morphogenesis: a mechanics based integration of cell growth at tissue scale
J Chopard, C Godin, J Traas
Proceedings of the 7th International Workshop on Information Processing in …, 2007
42007
3D modelling of water transfers in soil and roots systems
J Chopard
Proc. 4th Int. Workshop on Functional-Structural Plant Models, 7-11, 2004
42004
Phenomenal: a software framework for model-assisted analysis of high throughput plant phenotyping data
C Fournier, S Artzet, J Chopard, M Mielewczik, N Brichet, L Cabrera, ...
IAMPS 2015 (International Workshop on Image Analysis Methods for the Plant …, 2015
22015
Fostering Collaborations towards Integrative Research Development
N Brouwers, S Moore, T Lyons, G Hardy, J Chopard, G Matusick, ...
Forests 4 (2), 329-342, 2013
22013
Impact of a tree’s hydraulic strategy on its survival in a global climate change context
J Chopard, M Bader, EJ Veneklaas, M Renton
MODSIM2011, 19th International Congress on Modelling and Simulation. MSSANZ …, 2011
22011
OpenAlea: An open-source platform for the integration of heterogeneous FSPM components
S Dufour-Kowalski, C Pradal, N Dones, PB De Reuille, F Boudon, ...
FSPM07-5th International Workshop on Functional-Structural Plant Models, P36 …, 2007
22007
Genetic variability in light-related parameters of maize models revealed by linking 3D-reconstruction of plant architecture with light model and phenotyping platform
TW Chen, C Fournier, S Artzet, N Brichet, J Chopard, C Pradal, SA Prado, ...
2016 IEEE International Conference on Functional-Structural Plant Growth …, 2016
12016
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