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chaochao wu
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Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
8872016
A correlation algorithm for the automated quantitative analysis of shotgun proteomics data
MJ MacCoss, CC Wu, H Liu, R Sadygov, JR Yates
Analytical chemistry 75 (24), 6912-6921, 2003
3242003
Recommendations for the generation, quantification, storage, and handling of peptides used for mass spectrometry–based assays
AN Hoofnagle, JR Whiteaker, SA Carr, E Kuhn, T Liu, SA Massoni, ...
Clinical chemistry 62 (1), 48-69, 2016
2142016
CPTAC Assay Portal: a repository of targeted proteomic assays
JR Whiteaker, GN Halusa, AN Hoofnagle, V Sharma, B MacLean, P Yan, ...
Nature methods 11 (7), 703-704, 2014
1662014
A comprehensive and non‐prefractionation on the protein level approach for the human urinary proteome: touching phosphorylation in urine
QR Li, KX Fan, RX Li, J Dai, CC Wu, SL Zhao, JR Wu, CH Shieh, R Zeng
Rapid Communications in Mass Spectrometry 24 (6), 823-832, 2010
882010
Dysfunction of PLA2G6 and CYP2C44-associated network signals imminent carcinogenesis from chronic inflammation to hepatocellular carcinoma
M Li, C Li, WX Liu, C Liu, J Cui, Q Li, H Ni, Y Yang, C Wu, C Chen, X Zhen, ...
Journal of molecular cell biology 9 (6), 489-503, 2017
562017
Contributions of immunoaffinity chromatography to deep proteome profiling of human biofluids
C Wu, J Duan, T Liu, RD Smith, WJ Qian
Journal of Chromatography B 1021, 57-68, 2016
542016
Using the CPTAC assay portal to identify and implement highly characterized targeted proteomics assays
JR Whiteaker, GN Halusa, AN Hoofnagle, V Sharma, B MacLean, P Yan, ...
Quantitative Proteomics by Mass Spectrometry, 223-236, 2016
432016
Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis
T Shi, TL Fillmore, Y Gao, R Zhao, J He, AA Schepmoes, CD Nicora, ...
Analytical chemistry 85 (19), 9196-9203, 2013
432013
Targeted proteomic assays for quantitation of proteins identified by proteogenomic analysis of ovarian cancer
E Song, Y Gao, C Wu, T Shi, S Nie, TL Fillmore, AA Schepmoes, ...
Scientific data 4 (1), 1-13, 2017
382017
Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment
T Shi, Y Gao, MJ Gaffrey, CD Nicora, TL Fillmore, WB Chrisler, ...
Analytical chemistry 87 (2), 1103-1110, 2015
322015
Comprehensive quantitative analysis of ovarian and breast cancer tumor peptidomes
Z Xu, C Wu, F Xie, GW Slysz, N Tolic, ME Monroe, VA Petyuk, SH Payne, ...
Journal of proteome research 14 (1), 422-433, 2015
322015
Expediting SRM assay development for large-scale targeted proteomics experiments
C Wu, T Shi, JN Brown, J He, Y Gao, TL Fillmore, AK Shukla, RJ Moore, ...
Journal of proteome research 13 (10), 4479-4487, 2014
322014
Proteomic mining in the dysplastic liver of WHV/c‐myc mice – insights and indicators for early hepatocarcinogenesis
Y Liu, C Li, Z Xing, X Yuan, Y Wu, M Xu, K Tu, Q Li, C Wu, M Zhao, R Zeng
The FEBS Journal 277 (19), 4039-4053, 2010
322010
Analytical platform evaluation for quantification of ERG in prostate cancer using protein and mRNA detection methods
J He, AA Schepmoes, T Shi, C Wu, TL Fillmore, Y Gao, RD Smith, ...
Journal of translational medicine 13, 1-14, 2015
302015
Delicate analysis of post-translational modifications on Dishevelled 3
C Wu, W Wei, C Li, Q Li, Q Sheng, R Zeng
Journal of proteome research 11 (7), 3829-3837, 2012
152012
Preconditioning in the rhesus macaque induces a proteomic signature following cerebral ischemia that is associated with neuroprotection
SL Stevens, T Liu, FR Bahjat, VA Petyuk, AA Schepmoes, RL Sontag, ...
Translational stroke research 10, 440-448, 2019
112019
An optimized informatics pipeline for mass spectrometry-based peptidomics
C Wu, ME Monroe, Z Xu, GW Slysz, SH Payne, KD Rodland, T Liu, ...
Journal of the American Society for Mass Spectrometry 26 (12), 2002-2008, 2015
112015
Quantification of mutant SPOP proteins in prostate cancer using mass spectrometry-based targeted proteomics
H Wang, CE Barbieri, J He, Y Gao, T Shi, C Wu, AA Schepmoes, ...
Journal of translational medicine 15, 1-10, 2017
92017
Accounting for population variation in targeted proteomics
GM Fujimoto, ME Monroe, L Rodriguez, C Wu, B MacLean, RD Smith, ...
Journal of proteome research 13 (1), 321-323, 2014
62014
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