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Andrea Rau
Andrea Rau
Senior research scientist, INRAE
Adresse e-mail validée de inrae.fr - Page d'accueil
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A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis
MA Dillies, A Rau, J Aubert, C Hennequet-Antier, M Jeanmougin, ...
Briefings in bioinformatics 14 (6), 671-683, 2013
16452013
Data-based filtering for replicated high-throughput transcriptome sequencing experiments
A Rau, M Gallopin, G Celeux, F Jaffrézic
Bioinformatics 29 (17), 2146-2152, 2013
2232013
Differential meta-analysis of RNA-seq data from multiple studies
A Rau, G Marot, F Jaffrézic
BMC bioinformatics 15, 1-10, 2014
1372014
Multi-species annotation of transcriptome and chromatin structure in domesticated animals
S Foissac, S Djebali, K Munyard, N Vialaneix, A Rau, K Muret, D Esquerré, ...
BMC biology 17, 1-25, 2019
1052019
Contribution of mammary epithelial cells to the immune response during early stages of a bacterial infection to Staphylococcus aureus
P Brenaut, L Lefèvre, A Rau, D Laloë, G Pisoni, P Moroni, C Bevilacqua, ...
Veterinary research 45, 1-20, 2014
942014
Co-expression analysis of high-throughput transcriptome sequencing data with Poisson mixture models
A Rau, C Maugis-Rabusseau, ML Martin-Magniette, G Celeux
Bioinformatics 31 (9), 1420-1427, 2015
862015
An empirical Bayesian method for estimating biological networks from temporal microarray data
A Rau, F Jaffrézic, JL Foulley, RW Doerge
Statistical Applications in Genetics and Molecular Biology 9 (1), 2010
852010
Transformation and model choice for RNA-seq co-expression analysis
A Rau, C Maugis-Rabusseau
Briefings in bioinformatics 19 (3), 425-436, 2018
792018
Identification of rumen microbial biomarkers linked to methane emission in Holstein dairy cows
Y Ramayo‐Caldas, L Zingaretti, M Popova, J Estellé, A Bernard, N Pons, ...
Journal of Animal Breeding and Genetics 137 (1), 49-59, 2020
782020
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis
G Rigaill, S Balzergue, V Brunaud, E Blondet, A Rau, O Rogier, J Caius, ...
Briefings in bioinformatics 19 (1), 65-76, 2018
612018
Clustering transformed compositional data using K-means, with applications in gene expression and bicycle sharing system data
A Godichon-Baggioni, C Maugis-Rabusseau, A Rau
Journal of Applied Statistics 46 (1), 47-65, 2019
492019
A hierarchical Poisson log-normal model for network inference from RNA sequencing data
M Gallopin, A Rau, F Jaffrézic
PloS one 8 (10), e77503, 2013
472013
A comprehensive overview of bull sperm-borne small non-coding RNAs and their diversity across breeds
E Sellem, S Marthey, A Rau, L Jouneau, A Bonnet, JP Perrier, S Fritz, ...
Epigenetics & Chromatin 13, 1-28, 2020
422020
Joint estimation of causal effects from observational and intervention gene expression data
A Rau, F Jaffrézic, G Nuel
BMC systems biology 7, 1-12, 2013
412013
Domestication rewired gene expression and nucleotide diversity patterns in tomato
C Sauvage, A Rau, C Aichholz, J Chadoeuf, G Sarah, M Ruiz, S Santoni, ...
The Plant Journal 91 (4), 631-645, 2017
402017
Compositional bias in naïve and chemically-modified phage-displayed libraries uncovered by paired-end deep sequencing
B He, KF Tjhung, NJ Bennett, Y Chou, A Rau, J Huang, R Derda
Scientific reports 8 (1), 1214, 2018
352018
Transcriptome profiling of the honeybee parasite Varroa destructor provides new biological insights into the mite adult life cycle
F Mondet, A Rau, C Klopp, M Rohmer, D Severac, Y Le Conte, C Alaux
BMC genomics 19, 1-19, 2018
322018
Cellular reprogramming for successful CNS axon regeneration is driven by a temporally changing cast of transcription factors
SP Dhara, A Rau, MJ Flister, NM Recka, MD Laiosa, PL Auer, AJ Udvadia
Scientific reports 9 (1), 14198, 2019
302019
Clustering high-throughput sequencing data with Poisson mixture models
A Rau, G Celeux, ML Martin-Magniette, C Maugis-Rabusseau
Inria, 2011
272011
Reverse engineering gene regulatory networks using approximate Bayesian computation
A Rau, F Jaffrézic, JL Foulley, RW Doerge
Statistics and Computing, 2011
272011
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Articles 1–20