Zhifeng (Francis) Jing
Zhifeng (Francis) Jing
Adresse e-mail validée de utexas.edu
TitreCitée parAnnée
[pi]-[pi] interaction of aromatic groups in amphiphilic molecules directing for single-crystalline mesostructured zeolite nanosheets
D Xu, Y Ma, Z Jing, L Han, B Singh, J Feng, X Shen, F Cao, P Oleynikov, ...
Nature communications 5, 4262, 2014
1302014
Tinker-HP: a Massively Parallel Molecular Dynamics Package for Multiscale Simulations of Large Complex Systems with Advanced Point Dipole Polarizable Force Fields
L Lagardère, LH Jolly, F Lipparini, F Aviat, B Stamm, Z Jing, M Harger, ...
Chemical Science 9 (4), 956-972, 2017
512017
AMOEBA Polarizable Atomic Multipole Force Field for Nucleic Acids
C Zhang, C Lu, Z Jing, C Wu, JP Piquemal, JW Ponder, P Ren
Journal of Chemical Theory and Computation 14 (4), 2084-2108, 2018
472018
Surfactants with Aromatic-Group Tail and Single Quaternary Ammonium Head for Directing Single-Crystalline Mesostructured Zeolite Nanosheets
D Xu, Z Jing, F Cao, H Sun, S Che
Chemistry of Materials 26 (15), 4612-4619, 2014
412014
Calculating binding free energies of host–guest systems using the AMOEBA polarizable force field
DR Bell, R Qi, Z Jing, JY Xiang, C Mejias, MJ Schnieders, JW Ponder, ...
Physical Chemistry Chemical Physics 18 (44), 30261-30269, 2016
292016
Polarizable force fields for biomolecular simulations: Recent advances and applications
Z Jing, C Liu, SY Cheng, R Qi, BD Walker, JP Piquemal, P Ren
Annual Review of Biophysics 48, 371-394, 2019
232019
Biocompatible and blood–brain barrier permeable carbon dots for inhibition of Aβ fibrillation and toxicity, and BACE1 activity
X Han, Z Jing, W Wu, B Zou, Z Peng, P Ren, A Wikramanayake, Z Lu, ...
Nanoscale 9 (35), 12862-12866, 2017
212017
Hierarchical atom type definitions and extensible all‐atom force fields
Z Jin, C Yang, F Cao, F Li, Z Jing, L Chen, Z Shen, L Xin, S Tong, H Sun
Journal of Computational Chemistry 37 (7), 653-664, 2016
172016
A Comment on the Reweighting Method for Accelerated Molecular Dynamics
Z Jing, H Sun
Journal of Chemical Theory and Computation 11 (6), 2395-2397, 2015
172015
Many-body effect determines the selectivity for Ca2+ and Mg2+ in proteins
Z Jing, C Liu, R Qi, P Ren
Proceedings of the National Academy of Sciences 115 (32), E7495-E7501, 2018
162018
Study of interactions between metal ions and protein model compounds by energy decomposition analyses and the AMOEBA force field
Z Jing, R Qi, C Liu, P Ren
The Journal of Chemical Physics 147 (16), 161733, 2017
162017
Elucidating the phosphate binding mode of phosphate-binding protein: The critical effect of buffer solution
R Qi, Z Jing, C Liu, JP Piquemal, KN Dalby, P Ren
The Journal of Physical Chemistry B 122 (24), 6371-6376, 2018
92018
Robust Antibacterial Activity of Tungsten Oxide (WO3-X) Nanodots
G Duan, L Chen, Z Jing, P De Luna, L Wen, L Zhang, L Zhao, J Xu, Z Li, ...
Chemical Research in Toxicology 32 (7), 1357-1366, 2019
52019
Replica Exchange Reactive Molecular Dynamics Simulations of Initial Reactions in Zeolite Synthesis
Z Jing, L Xin, H Sun
Physical Chemistry Chemical Physics, 2015
42015
Computational and Experimental Studies of Inhibitor Design for Aldolase A.
R Qi, B Walker, Z Jing, M Yu, G Stancu, R Edupuganti, KN Dalby, P Ren
The Journal of Physical Chemistry B 123 (28), 6034-6041, 2019
32019
Investigating the Association Mechanism between Rafoxanide and Povidone
F Meng, Z Jing, R Ferreira, P Ren, F Zhang
Langmuir 34 (46), 13971-13978, 2018
22018
Molecular Dynamics Study of the Hybridization between RNA and Modified Oligonucleotides
Z Jing, R Qi, M Thibonnier, P Ren
Journal of Chemical Theory and Computation 15 (11), 6422-6432, 2019
12019
Molecular dynamics free energy simulations of ATP:Mg2+ and ADP:Mg2+ using the polarisable force field AMOEBA
B Walker, Z Jing, P Ren
Molecular Simulation, 1-10, 2020
2020
AMOEBA polarizable force field for DNA, RNA and modified nucleic acids
Z Jing, R Qi, P Ren
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019
2019
Predicting the adsorption of n-perfluorohexane (n-C6F14) on BAM-P109 activated carbon using an ab initio force field
F Cao, Z Jing, H Sun
Adsorption Science & Technology 34 (1), 110-122, 2016
2016
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