Mathias Vandenbogaert
Mathias Vandenbogaert
Verified email at pasteur.fr
TitleCited byYear
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137, 2005
14412005
Alignment of LC‐MS images, with applications to biomarker discovery and protein identification
M Vandenbogaert, S Li‐Thiao‐Té, HM Kaltenbach, R Zhang, T Aittokallio, ...
Proteomics 8 (4), 650-672, 2008
1062008
A preliminary study of viral metagenomics of French bat species in contact with humans: identification of new mammalian viruses
L Dacheux, M Cervantes-Gonzalez, G Guigon, JM Thiberge, ...
PLoS One 9 (1), e87194, 2014
672014
Assessing the statistical significance of overrepresented oligonucleotides
A Denise, M Régnier, M Vandenbogaert
International Workshop on Algorithms in Bioinformatics, 85-97, 2001
432001
Genomic epidemiology and global diversity of the emerging bacterial pathogen Elizabethkingia anophelis
S Breurec, A Criscuolo, L Diancourt, O Rendueles, M Vandenbogaert, ...
Scientific reports 6, 30379, 2016
292016
Mycobacterial pan-genome analysis suggests important role of plasmids in the radiation of type VII secretion systems
E Dumas, E Christina Boritsch, M Vandenbogaert, ...
Genome biology and evolution 8 (2), 387-402, 2016
292016
Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications
G Sapriel, J Konjek, M Orgeur, L Bouri, L Frézal, AL Roux, E Dumas, ...
BMC genomics 17 (1), 118, 2016
262016
Pantoea coffeiphila sp. nov., cause of the ‘potato taste’of Arabica coffee from the African Great Lakes region
D Gueule, G Fourny, E Ageron, A Le Fleche-Mateos, M Vandenbogaert, ...
International journal of systematic and evolutionary microbiology 65 (1), 23-29, 2015
222015
Comparison of statistical significance criteria
M Régnier, M Vandenbogaert
Journal of Bioinformatics and Computational Biology 4 (02), 537-551, 2006
212006
Assessing the significance of sets of words
V Boeva, J Clément, M Régnier, M Vandenbogaert
Annual Symposium on Combinatorial Pattern Matching, 358-370, 2005
152005
Rouxiella chamberiensis gen. nov., sp. nov., a member of the family Enterobacteriaceae isolated from parenteral nutrition bags
A Le Flèche-Matéos, M Levast, F Lomprez, Y Arnoux, C Andonian, ...
International journal of systematic and evolutionary microbiology 65 (6 …, 2015
142015
Analysis of bacterial RM-systems through genome-scale analysis and related taxonomy issues
M Vandenbogaert, V Makeev
In silico biology 3 (1, 2), 127-143, 2003
142003
Early minion™ nanopore single-molecule sequencing technology enables the characterization of hepatitis B virus genetic complexity in clinical samples
V Sauvage, L Boizeau, D Candotti, M Vandenbogaert, A Servant-Delmas, ...
PloS one 13 (3), e0194366, 2018
122018
Automated phosphopeptide identification using multiple MS/MS fragmentation modes
M Vandenbogaert, V Hourdel, O Jardin-Mathé, J Bigeard, L Bonhomme, ...
Journal of proteome research 11 (12), 5695-5703, 2012
112012
Zika virus evolution on the edges of the Pacific ocean
M Dupont-Rouzeyrol, L Diancourt, E Calvez, M Vandenbogaert, ...
Emerging microbes & infections 6 (12), e111, 2017
92017
SARS-CoV related Betacoronavirus and diverse Alphacoronavirus members found in western old-world
MA Gouilh, SJ Puechmaille, L Diancourt, M Vandenbogaert, J Serra-Cobo, ...
Virology 517, 88-97, 2018
62018
Rouxiella badensis sp. nov. and Rouxiella silvae sp. nov. isolated from peat bog soil and emendation description of the genus Rouxiella
A Le Flèche-Matéos, JH Kügler, SH Hansen, C Syldatk, R Hausmann, ...
International journal of systematic and evolutionary microbiology 67 (5 …, 2017
32017
Identification of genetic pathways driving Ebola virus disease in humans and targets for therapeutic intervention
DA Achinko, A Dormer, M Narayanan, EF Norman, M Abbas
F1000Research 5, 2016
22016
Rouxiella chamberiensis gen. nov., sp. nov., a new Enterobacteriaceae isolated from parenteral nutrition bags.
A Le Fleche-Mateos, M Levast, F Lomprez, Y Arnoux, C Andonian, ...
12015
MetaGenSense: A web-application for analysis and exploration of high throughput sequencing metagenomic data
D Correia, O Doppelt-Azeroual, JB Denis, M Vandenbogaert, V Caro
F1000Research 4, 2015
12015
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Articles 1–20