| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1454 | 2020 |
| Combining multiple microarray studies and modeling interstudy variation JK Choi, U Yu, S Kim, OJ Yoo Bioinformatics 19 (suppl_1), i84-i90, 2003 | 526 | 2003 |
| Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020 | 501 | 2020 |
| Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer HO Lee, Y Hong, HE Etlioglu, YB Cho, V Pomella, B Van den Bosch, ... Nature genetics 52 (6), 594-603, 2020 | 425 | 2020 |
| Differential coexpression analysis using microarray data and its application to human cancer JK Choi, U Yu, OJ Yoo, S Kim Bioinformatics 21 (24), 4348-4355, 2005 | 308 | 2005 |
| DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load H Jung, HS Kim, JY Kim, JM Sun, JS Ahn, MJ Ahn, K Park, M Esteller, ... Nature communications 10 (1), 4278, 2019 | 304 | 2019 |
| Intrinsic variability of gene expression encoded in nucleosome positioning sequences JK Choi, YJ Kim Nature genetics 41 (4), 498-503, 2009 | 158 | 2009 |
| Contrasting chromatin organization of CpG islands and exons in the human genome JK Choi Genome biology 11, 1-8, 2010 | 147 | 2010 |
| Integrative pathway enrichment analysis of multivariate omics data M Paczkowska, J Barenboim, N Sintupisut, NS Fox, H Zhu, D Abd-Rabbo, ... Nature communications 11 (1), 735, 2020 | 136 | 2020 |
| Integrative analysis of multiple gene expression profiles applied to liver cancer study JK Choi, JY Choi, DG Kim, DW Choi, BY Kim, KH Lee, YI Yeom, HS Yoo, ... FEBS letters 565 (1-3), 93-100, 2004 | 125 | 2004 |
| Genome-wide profiles of H2AX and γ-H2AX differentiate endogenous and exogenous DNA damage hotspots in human cells J Seo, SC Kim, HS Lee, JK Kim, HJ Shon, NLM Salleh, KV Desai, JH Lee, ... Nucleic Acids Research 40 (13), 5965-5974, 2012 | 124 | 2012 |
| Epigenetic regulation and the variability of gene expression JK Choi, YJ Kim Nature genetics 40 (2), 141-147, 2008 | 111 | 2008 |
| Pathway and network analysis of more than 2500 whole cancer genomes MA Reyna, D Haan, M Paczkowska, LPC Verbeke, M Vazquez, ... Nature communications 11 (1), 729, 2020 | 94 | 2020 |
| Genetic and metabolic characterization of insomnia HJ Ban, SC Kim, J Seo, HB Kang, JK Choi PloS one 6 (4), e18455, 2011 | 92 | 2011 |
| Nucleosome deposition and DNA methylation at coding region boundaries JK Choi, JB Bae, J Lyu, TY Kim, YJ Kim Genome biology 10, 1-10, 2009 | 90 | 2009 |
| SET7/9 methylation of the pluripotency factor LIN28A is a nucleolar localization mechanism that blocks let-7 biogenesis in human ESCs SK Kim, H Lee, K Han, SC Kim, Y Choi, SW Park, G Bak, Y Lee, JK Choi, ... Cell stem cell 15 (6), 735-749, 2014 | 89 | 2014 |
| Environmental effects on gene expression phenotype have regional biases in the human genome JK Choi, SC Kim Genetics 175 (4), 1607-1613, 2007 | 87 | 2007 |
| Matrix stiffness epigenetically regulates the oncogenic activation of the Yes-associated protein in gastric cancer M Jang, J An, SW Oh, JY Lim, J Kim, JK Choi, JH Cheong, P Kim Nature Biomedical Engineering 5 (1), 114-123, 2021 | 79 | 2021 |
| Identification of DNA methylation changes associated with human gastric cancer JH Park, J Park, JK Choi, J Lyu, MG Bae, YG Lee, JB Bae, DY Park, ... BMC medical genomics 4, 1-15, 2011 | 69 | 2011 |
| Genome-wide methylation patterns predict clinical benefit of immunotherapy in lung cancer JY Kim, JK Choi, H Jung Clinical epigenetics 12, 1-10, 2020 | 63 | 2020 |
