| Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans K Koelle, S Cobey, B Grenfell, M Pascual Science 314 (5807), 1898-1903, 2006 | 578 | 2006 |
| Viral phylodynamics EM Volz, K Koelle, T Bedford PLoS computational biology 9 (3), e1002947, 2013 | 522 | 2013 |
| Refractory periods and climate forcing in cholera dynamics K Koelle, X Rodó, M Pascual, M Yunus, G Mostafa Nature 436 (7051), 696-700, 2005 | 484 | 2005 |
| The changing epidemiology of SARS-CoV-2 K Koelle, MA Martin, R Antia, B Lopman, NE Dean Science 375 (6585), 1116-1121, 2022 | 315 | 2022 |
| Global patterns in seasonal activity of influenza A/H3N2, A/H1N1, and B from 1997 to 2005: viral coexistence and latitudinal gradients BS Finkelman, C Viboud, K Koelle, MJ Ferrari, N Bharti, BT Grenfell PloS one 2 (12), e1296, 2007 | 292 | 2007 |
| The long-term safety, public health impact, and cost-effectiveness of routine vaccination with a recombinant, live-attenuated dengue vaccine (Dengvaxia): a model comparison study S Flasche, M Jit, I Rodríguez-Barraquer, L Coudeville, M Recker, K Koelle, ... PLoS medicine 13 (11), e1002181, 2016 | 214 | 2016 |
| Shifting patterns: malaria dynamics and rainfall variability in an African highland M Pascual, B Cazelles, MJ Bouma, LF Chaves, K Koelle Proceedings of the Royal Society B: Biological Sciences 275 (1631), 123-132, 2008 | 210 | 2008 |
| Decreases in dengue transmission may act to increase the incidence of dengue hemorrhagic fever Y Nagao, K Koelle Proceedings of the National Academy of Sciences 105 (6), 2238-2243, 2008 | 202 | 2008 |
| Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel D Miller, MA Martin, N Harel, O Tirosh, T Kustin, M Meir, N Sorek, ... Nature communications 11 (1), 5518, 2020 | 195 | 2020 |
| Inference for nonlinear epidemiological models using genealogies and time series DA Rasmussen, O Ratmann, K Koelle PLoS computational biology 7 (8), e1002136, 2011 | 191 | 2011 |
| Disentangling extrinsic from intrinsic factors in disease dynamics: a nonlinear time series approach with an application to cholera K Koelle, M Pascual The American Naturalist 163 (6), 901-913, 2004 | 190 | 2004 |
| Pathogen adaptation to seasonal forcing and climate change K Koelle, M Pascual, M Yunus Proceedings of the Royal Society B: Biological Sciences 272 (1566), 971-977, 2005 | 178 | 2005 |
| Phylodynamic inference for structured epidemiological models DA Rasmussen, EM Volz, K Koelle PLoS computational biology 10 (4), e1003570, 2014 | 123 | 2014 |
| Transmission bottleneck size estimation from pathogen deep-sequencing data, with an application to human influenza A virus A Sobel Leonard, DB Weissman, B Greenbaum, E Ghedin, K Koelle Journal of virology 91 (14), 10.1128/jvi. 00171-17, 2017 | 122 | 2017 |
| Dispersal‐induced desynchronization: from metapopulations to metacommunities K Koelle, J Vandermeer Ecology Letters 8 (2), 167-175, 2005 | 121 | 2005 |
| Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck KM Braun, GK Moreno, PJ Halfmann, EB Hodcroft, DA Baker, EC Boehm, ... PLoS pathogens 17 (2), e1009373, 2021 | 119 | 2021 |
| Deep sequencing of influenza A virus from a human challenge study reveals a selective bottleneck and only limited intrahost genetic diversification A Sobel Leonard, MT McClain, GJD Smith, DE Wentworth, RA Halpin, ... Journal of virology 90 (24), 11247-11258, 2016 | 115 | 2016 |
| Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks KM Braun, GK Moreno, C Wagner, MA Accola, WM Rehrauer, DA Baker, ... PLoS pathogens 17 (8), e1009849, 2021 | 102 | 2021 |
| Minimal within-host dengue models highlight the specific roles of the immune response in primary and secondary dengue infections R Ben-Shachar, K Koelle Journal of the Royal Society Interface 12 (103), 20140886, 2015 | 100 | 2015 |
| Live attenuated HIV vaccines: predicting the tradeoff between efficacy and safety SM Blower, K Koelle, DE Kirschner, J Mills Proceedings of the National Academy of Sciences 98 (6), 3618-3623, 2001 | 88 | 2001 |
David A RasmussenNorth Carolina State UniversityVerified email at ncsu.edu
