Sebastien Carrere
Sebastien Carrere
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ProDom: automated clustering of homologous domains
F Servant, C Bru, S Carrere, E Courcelle, J Gouzy, D Peyruc, D Kahn
Briefings in bioinformatics 3 (3), 246-251, 2002
The ProDom database of protein domain families: more emphasis on 3D
C Bru, E Courcelle, S Carrère, Y Beausse, S Dalmar, D Kahn
Nucleic acids research 33 (suppl_1), D212-D215, 2005
Mobyle: a new full web bioinformatics framework
B Néron, H Ménager, C Maufrais, N Joly, J Maupetit, S Letort, S Carrere, ...
Bioinformatics 25 (22), 3005-3011, 2009
The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution
H Badouin, J Gouzy, CJ Grassa, F Murat, SE Staton, L Cottret, ...
Nature 546 (7656), 148-152, 2017
An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser‐capture microdissection coupled to RNA sequencing
B Roux, N Rodde, MF Jardinaud, T Timmers, L Sauviac, L Cottret, ...
The Plant Journal 77 (6), 817-837, 2014
Genome sequence of the β-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia
C Amadou, G Pascal, S Mangenot, M Glew, C Bontemps, D Capela, ...
Genome Research 18 (9), 1472-1483, 2008
Genomic structure and phylogeny of the plant pathogen Ralstonia solanacearum inferred from gene distribution analysis
A Guidot, P Prior, J Schoenfeld, S Carrere, S Genin, C Boucher
Journal of bacteriology 189 (2), 377-387, 2007
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
I Pieretti, M Royer, V Barbe, S Carrere, R Koebnik, S Cociancich, ...
BMC genomics 10 (1), 1-15, 2009
Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex
N Peeters, S Carrère, M Anisimova, L Plener, AC Cazalé, S Genin
BMC genomics 14 (1), 1-19, 2013
The Rosa genome provides new insights into the domestication of modern roses
O Raymond, J Gouzy, J Just, H Badouin, M Verdenaud, A Lemainque, ...
Nature genetics 50 (6), 772-777, 2018
Full‐length de novo assembly of RNA‐seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species
S Alves‐Carvalho, G Aubert, S Carrère, C Cruaud, AL Brochot, F Jacquin, ...
The Plant Journal 84 (1), 1-19, 2015
Two direct targets of cytokinin signaling regulate symbiotic nodulation in Medicago truncatula
F Ariel, M Brault-Hernandez, C Laffont, E Huault, M Brault, J Plet, ...
The Plant Cell 24 (9), 3838-3852, 2012
FrameDP: sensitive peptide detection on noisy matured sequences
J Gouzy, S Carrere, T Schiex
Bioinformatics 25 (5), 670-671, 2009
RNA-Seq analysis of rye-grass transcriptomic response to an herbicide inhibiting acetolactate-synthase identifies transcripts linked to non-target-site-based resistance
A Duhoux, S Carrère, J Gouzy, L Bonin, C Délye
Plant Molecular Biology 87 (4-5), 473-487, 2015
Using Ecology, Physiology, and Genomics to Understand Host Specificity in Xanthomonas
MA Jacques, M Arlat, A Boulanger, T Boureau, S Carrère, S Cesbron, ...
Annual review of phytopathology 54, 163-187, 2016
Next-Generation Annotation of Prokaryotic Genomes with EuGene-P: Application to Sinorhizobium meliloti 2011
E Sallet, B Roux, L Sauviac, MF Jardinaud, S Carrere, T Faraut, ...
DNA research 20 (4), 339-354, 2013
Whole-genome landscape of Medicago truncatula symbiotic genes
Y Pecrix, SE Staton, E Sallet, C Lelandais-Brière, S Moreau, S Carrere, ...
Nature Plants 4 (12), 1017-1025, 2018
Specific Genes from the Potato Brown Rot Strains of Ralstonia solanacearum and Their Potential Use for Strain Detection
A Guidot, M Elbaz, S Carrère, MI Siri, MJ Pianzzola, P Prior, C Boucher
Phytopathology 99 (9), 1105-1112, 2009
Transcriptome database resource and gene expression atlas for the rose
A Dubois, S Carrere, O Raymond, B Pouvreau, L Cottret, A Roccia, ...
BMC genomics 13 (1), 1-12, 2012
A gene-phenotype network based on genetic variability for drought responses reveals key physiological processes in controlled and natural environments
D Rengel, S Arribat, P Maury, ML Martin-Magniette, T Hourlier, M Laporte, ...
PloS one 7 (10), e45249, 2012
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