Mihai Pop
Mihai Pop
Professor of Computer Science, University of Maryland, College Park
Adresse e-mail validée de umd.edu - Page d'accueil
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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
B Langmead, C Trapnell, M Pop, SL Salzberg
Genome biology 10 (3), 1-10, 2009
186632009
Structure, function and diversity of the healthy human microbiome
C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ...
Nature 486 (7402), 207, 2012
68292012
Metagenomic analysis of the human distal gut microbiome
SR Gill, M Pop, RT DeBoy, PB Eckburg, PJ Turnbaugh, BS Samuel, ...
Science 312 (5778), 1355-1359, 2006
44692006
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
nature 450 (7167), 203, 2007
20132007
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
Nature 486 (7402), 215, 2012
16522012
The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease
NM El-Sayed, PJ Myler, DC Bartholomeu, D Nilsson, G Aggarwal, ...
Science 309 (5733), 409-415, 2005
15852005
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
KE Nelson, C Weinel, IT Paulsen, RJ Dodson, H Hilbert, ...
Environmental microbiology 4 (12), 799-808, 2002
14642002
Differential abundance analysis for microbial marker-gene surveys
JN Paulson, OC Stine, HC Bravo, M Pop
Nature methods 10 (12), 1200-1202, 2013
12742013
Statistical methods for detecting differentially abundant features in clinical metagenomic samples
JR White, N Nagarajan, M Pop
PLoS Comput Biol 5 (4), e1000352, 2009
11752009
ARDB—antibiotic resistance genes database
B Liu, M Pop
Nucleic acids research 37 (suppl_1), D443-D447, 2009
10052009
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria
TD Read, SN Peterson, N Tourasse, LW Baillie, IT Paulsen, KE Nelson, ...
Nature 423 (6935), 81-86, 2003
9182003
The genome of the protist parasite Entamoeba histolytica
B Loftus, I Anderson, R Davies, UCM Alsmark, J Samuelson, P Amedeo, ...
Nature 433 (7028), 865-868, 2005
9082005
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
JM Carlton, SV Angiuoli, BB Suh, TW Kooij, M Pertea, JC Silva, ...
Nature 419 (6906), 512-519, 2002
8562002
GAGE: A critical evaluation of genome assemblies and assembly algorithms
SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ...
Genome research 22 (3), 557-567, 2012
7602012
The dog genome: survey sequencing and comparative analysis
EF Kirkness, V Bafna, AL Halpern, S Levy, K Remington, DB Rusch, ...
Science 301 (5641), 1898-1903, 2003
6672003
Draft genome of the filarial nematode parasite Brugia malayi
E Ghedin, S Wang, D Spiro, E Caler, Q Zhao, J Crabtree, JE Allen, ...
Science 317 (5845), 1756-1760, 2007
6532007
Bioinformatics challenges of new sequencing technology
M Pop, SL Salzberg
Trends in genetics 24 (3), 142-149, 2008
6012008
Searching for SNPs with cloud computing
B Langmead, MC Schatz, J Lin, M Pop, SL Salzberg
Genome biology 10 (11), 1-10, 2009
6002009
Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis
TD Read, SL Salzberg, M Pop, M Shumway, L Umayam, L Jiang, ...
Science 296 (5575), 2028-2033, 2002
5042002
Sequence assembly demystified
N Nagarajan, M Pop
Nature Reviews Genetics 14 (3), 157-167, 2013
4962013
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