Jean-François Taly
Jean-François Taly
CRG - Centre for Genomic regulation - Barcelona
Adresse e-mail validée de crg.es
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T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension
P Di Tommaso, S Moretti, I Xenarios, M Orobitg, A Montanyola, JM Chang, ...
Nucleic acids research 39 (suppl_2), W13-W17, 2011
9192011
ABC likelihood-free methods for model choice in Gibbs random fields
A Grelaud, JM Marin, CP Robert, F Rodolphe, JF Taly
Bayesian Analysis 4 (2), 317-335, 2009
199*2009
Protein secondary structure assignment revisited: a detailed analysis of different assignment methods
J Martin, G Letellier, A Marin, JF Taly, AG de Brevern, JF Gibrat
BMC structural biology 5 (1), 1-17, 2005
1692005
Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee
JM Chang, P Di Tommaso, JF Taly, C Notredame
BMC bioinformatics 13 (4), 1-7, 2012
1172012
Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures
JF Taly, C Magis, G Bussotti, JM Chang, P Di Tommaso, I Erb, ...
Nature protocols 6 (11), 1669-1682, 2011
1022011
Large-Scale Screening of a Targeted Enterococcus faecalis Mutant Library Identifies Envelope Fitness Factors
L Rigottier-Gois, A Alberti, A Houel, JF Taly, P Palcy, J Manson, D Pinto, ...
PloS one 6 (12), e29023, 2011
642011
T-Coffee: tree-based consistency objective function for alignment evaluation
C Magis, JF Taly, G Bussotti, JM Chang, P Di Tommaso, I Erb, ...
Multiple Sequence Alignment Methods, 117-129, 2014
582014
Pharmacological assessment defines Leishmania donovani casein kinase 1 as a drug target and reveals important functions in parasite viability and intracellular infection
N Rachidi, JF Taly, E Durieu, O Leclercq, N Aulner, E Prina, P Pescher, ...
Antimicrobial agents and chemotherapy 58 (3), 1501-1515, 2014
442014
Cyclosporin A Treatment of Leishmania donovani Reveals Stage-Specific Functions of Cyclophilins in Parasite Proliferation and Viability
WL Yau, T Blisnick, JF Taly, M Helmer-Citterich, C Schiene-Fischer, ...
PLoS neglected tropical diseases 4 (6), e729, 2010
372010
STRIKE: evaluation of protein MSAs using a single 3D structure
C Kemena, JF Taly, J Kleinjung, C Notredame
Bioinformatics 27 (24), 3385-3391, 2011
322011
Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?
JF Taly, A Marin, JF Gibrat
BMC bioinformatics 9 (1), 1-24, 2008
192008
SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos
D Cicin-Sain, AH Pulido, A Crombach, KR Wotton, E Jiménez-Guri, ...
Nucleic Acids Research 43 (D1), D751-D755, 2015
182015
Efficient and interpretable prediction of protein functional classes by correspondence analysis and compact set relations
JM Chang, JF Taly, I Erb, TY Sung, WL Hsu, CY Tang, C Notredame, ...
PloS one 8 (10), e75542, 2013
82013
STRIKE: Evaluation of Protein Multiple Sequence Alignments us-ing a Single Three Dimensional Structure
C Kemena, JF Taly, J Kleinjung, C Notredame
Bioinformatics, 2011
12011
Efficient and Interpretable Prediction of Protein Functional Classes by Correspondence
JM Chang, JF Taly, I Erb, TY Sung, WL Hsu
2013
Large-Scale Screening of Enterococcus faecalis Mutant Library Identifies Envelope Fitness Factors
L Rigottier-Gois, A Alberti, A Houel, JF Taly, P Palcy, J Manson, D Pinto, ...
2011
Large-Scale Screening of a Targeted Enterococcus faecalis Mutant Library Identifies
L Rigottier-Gois, A Alberti, A Houel, JF Taly, P Palcy
2011
Cyclosporin A Treatment of Leishmania donovani Reveals Stage-Specific
WL Yau, T Blisnick, JF Taly, M Helmer-Citterich, C Schiene-Fischer
2010
Choix de modèle pour les champs de Gibbs par un algorithme ABC.
F Rodolphe, JM Marin, JF Taly, A Grelaud, CP Robert
2009
Choix de modèle pour les champs de Gibbs par un algorithme ABC.
A Grelaud, C Robert, JM Marin, F Rodolphe, JF Taly
41èmes Journées de Statistique, SFdS, Bordeaux, 2009
2009
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