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Paul Igor Costea
Paul Igor Costea
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Environment dominates over host genetics in shaping human gut microbiota
D Rothschild, O Weissbrod, E Barkan, A Kurilshikov, T Korem, D Zeevi, ...
Nature 555 (7695), 210-215, 2018
23792018
Structure and function of the global ocean microbiome
S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ...
Science 348 (6237), 1261359, 2015
23432015
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ...
Nature 528 (7581), 262-266, 2015
19572015
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
PL Ståhl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ...
Science 353 (6294), 78-82, 2016
16762016
Salt-responsive gut commensal modulates TH17 axis and disease
N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ...
Nature 551 (7682), 585-589, 2017
10862017
Potential of fecal microbiota for early‐stage detection of colorectal cancer
G Zeller, J Tap, AY Voigt, S Sunagawa, JR Kultima, PI Costea, A Amiot, ...
Molecular systems biology 10 (11), 766, 2014
10432014
Enterotypes in the landscape of gut microbial community composition
PI Costea, F Hildebrand, M Arumugam, F Bäckhed, MJ Blaser, ...
Nature microbiology 3 (1), 8-16, 2018
8682018
Towards standards for human fecal sample processing in metagenomic studies
PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ...
Nature biotechnology 35 (11), 1069-1076, 2017
7262017
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
PL Stahl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ...
Science 353 (6294), 78-82, 2016
6902016
Durable coexistence of donor and recipient strains after fecal microbiota transplantation
SS Li, A Zhu, V Benes, PI Costea, R Hercog, F Hildebrand, ...
Science 352 (6285), 586-589, 2016
5522016
Extensive transmission of microbes along the gastrointestinal tract
TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ...
elife 8, e42693, 2019
3722019
Microbial abundance, activity and population genomic profiling with mOTUs2
A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ...
Nature communications 10 (1), 1014, 2019
3462019
Selective maternal seeding and environment shape the human gut microbiome
K Korpela, P Costea, LP Coelho, S Kandels-Lewis, G Willemsen, ...
Genome research 28 (4), 561-568, 2018
3052018
Similarity of the dog and human gut microbiomes in gene content and response to diet
LP Coelho, JR Kultima, PI Costea, C Fournier, Y Pan, ...
Microbiome 6, 1-11, 2018
2572018
Temporal and technical variability of human gut metagenomes
AY Voigt, PI Costea, JR Kultima, SS Li, G Zeller, S Sunagawa, P Bork
Genome biology 16, 1-12, 2015
1842015
Tara Oceans coordinators
S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ...
Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon …, 2015
1542015
The microbiomes of blowflies and houseflies as bacterial transmission reservoirs
ACM Junqueira, A Ratan, E Acerbi, DI Drautz-Moses, BNV Premkrishnan, ...
Scientific reports 7 (1), 16324, 2017
1392017
Subspecies in the global human gut microbiome
PI Costea, LP Coelho, S Sunagawa, R Munch, J Huerta‐Cepas, ...
Molecular systems biology 13 (12), 960, 2017
1222017
metaSNV: a tool for metagenomic strain level analysis
PI Costea, R Munch, LP Coelho, L Paoli, S Sunagawa, P Bork
PloS one 12 (7), e0182392, 2017
1052017
A fair comparison
PI Costea, G Zeller, S Sunagawa, P Bork
Nature methods 11 (4), 359-359, 2014
812014
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