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Thomas Seidel
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Molecule-pharmacophore superpositioning and pattern matching in computational drug design
G Wolber, T Seidel, F Bendix, T Langer
Drug discovery today 13 (1-2), 23-29, 2008
3742008
A compact review of molecular property prediction with graph neural networks
O Wieder, S Kohlbacher, M Kuenemann, A Garon, P Ducrot, T Seidel, ...
Drug Discovery Today: Technologies 37, 1-12, 2020
3292020
Structure and reaction based evaluation of synthetic accessibility
K Boda, T Seidel, J Gasteiger
Journal of computer-aided molecular design 21, 311-325, 2007
1972007
Strategies for 3D pharmacophore-based virtual screening
T Seidel, G Ibis, F Bendix, G Wolber
Drug Discovery Today: Technologies 7 (4), e221-e228, 2010
1482010
Common hits approach: combining pharmacophore modeling and molecular dynamics simulations
M Wieder, A Garon, U Perricone, S Boresch, T Seidel, AM Almerico, ...
Journal of chemical information and modeling 57 (2), 365-385, 2017
712017
The pharmacophore concept and its applications in computer-aided drug design
T Seidel, DA Schuetz, A Garon, T Langer
Progress in the Chemistry of Organic Natural Products 110: Cheminformatics …, 2019
672019
Applications of the pharmacophore concept in natural product inspired drug design
T Seidel, O Wieder, A Garon, T Langer
Molecular Informatics 39 (11), 2000059, 2020
522020
Conformational sampling of small molecules with iCon: performance assessment in comparison with OMEGA
G Poli, T Seidel, T Langer
Frontiers in chemistry 6, 229, 2018
512018
Second-generation de novo design: a view from a medicinal chemist perspective
A Zaliani, K Boda, T Seidel, A Herwig, CH Schwab, J Gasteiger, ...
Journal of computer-aided molecular design 23, 593-602, 2009
452009
Discovery of potent inhibitors for the large neutral amino acid transporter 1 (LAT1) by structure-based methods
N Singh, M Scalise, M Galluccio, M Wieder, T Seidel, T Langer, C Indiveri, ...
International journal of molecular sciences 20 (1), 27, 2018
422018
3D Pharmacophore Modeling Techniques in Computer‐Aided Molecular Design Using LigandScout
T Seidel, SD Bryant, G Ibis, G Poli, T Langer
Tutorials in chemoinformatics, 279-309, 2017
382017
Evaluating the stability of pharmacophore features using molecular dynamics simulations
M Wieder, U Perricone, S Boresch, T Seidel, T Langer
Biochemical and biophysical research communications 470 (3), 685-689, 2016
352016
Identification of the putative binding pocket of valerenic acid on GABAA receptors using docking studies and site‐directed mutagenesis
D Luger, G Poli, M Wieder, M Stadler, S Ke, M Ernst, A Hohaus, T Linder, ...
British Journal of Pharmacology 172 (22), 5403-5413, 2015
352015
A Molecular Dynamics–Shared Pharmacophore Approach to Boost Early‐Enrichment Virtual Screening: A Case Study on Peroxisome Proliferator‐Activated Receptor α
U Perricone, M Wieder, T Seidel, T Langer, A Padova, AM Almerico, ...
ChemMedChem 12 (16), 1399-1407, 2017
302017
A computational approach to identify potential novel inhibitors against the coronavirus SARS‐CoV‐2
V Battisti, O Wieder, A Garon, T Seidel, E Urban, T Langer
Molecular informatics 39 (10), 2000090, 2020
262020
Comparing pharmacophore models derived from crystal structures and from molecular dynamics simulations
M Wieder, U Perricone, T Seidel, S Boresch, T Langer
Monatshefte für Chemie-Chemical Monthly 147, 553-563, 2016
252016
GRAIL: Grids of pharmacophore interaction fields
DA Schuetz, T Seidel, A Garon, R Martini, M Körbel, GF Ecker, T Langer
Journal of Chemical Theory and Computation 14 (9), 4958-4970, 2018
232018
Improved lipophilicity and aqueous solubility prediction with composite graph neural networks
O Wieder, M Kuenemann, M Wieder, T Seidel, C Meyer, SD Bryant, ...
Molecules 26 (20), 6185, 2021
202021
A Combination of pharmacophore and docking‐based virtual screening to discover new tyrosinase inhibitors
S Vittorio, T Seidel, MP Germanò, R Gitto, L Ielo, A Garon, A Rapisarda, ...
Molecular Informatics 39 (3), 1900054, 2020
182020
Carbenoid-Mediated Homologation Tactics for Assembling (Fluorinated) Epoxides and Aziridines
L Ielo, V Pillari, M Miele, D Castiglione, V Pace
Synlett 32 (06), 551-560, 2021
142021
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