The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis TM Walker, P Miotto, CU Köser, PW Fowler, J Knaggs, Z Iqbal, M Hunt, ... The Lancet Microbe 3 (4), e265-e273, 2022 | 185 | 2022 |
Guideline: delayed umbilical cord clamping for improved maternal and infant health and nutrition outcomes WHO Guidelines Approved by the Guidelines Review Committee Geneva: World Health Organization Copyright, 2014 | 120 | 2014 |
Application of machine learning techniques to tuberculosis drug resistance analysis DACCC Samaneh Kouchaki, Yang Yang, T Walker, A Sarah Walker, Daniel J Wilson ... Bioinformatics 35 (13), 2276-2282, 2019 | 90 | 2019 |
Validating a 14-drug microtiter plate containing bedaquiline and delamanid for large-scale research susceptibility testing of Mycobacterium tuberculosis PMV Rancoita, F Cugnata, AL Gibertoni Cruz, E Borroni, SJ Hoosdally, ... Antimicrobial agents and chemotherapy 62 (9), 10.1128/aac. 00344-18, 2018 | 84 | 2018 |
A data compendium associating the genomes of 12,289 Mycobacterium tuberculosis isolates with quantitative resistance phenotypes to 13 antibiotics PLoS Biology 20 (8), 2022 | 70* | 2022 |
Accelerating Metropolis-Hastings algorithms by delayed acceptance M Banterle, C Grazian, A Lee, CP Robert arXiv preprint arXiv:1503.00996, 2015 | 60 | 2015 |
Epidemiological cut-off values for a 96-well broth microdilution plate for high-throughput research antibiotic susceptibility testing of M. tuberculosis CRyPTIC Consortium European Respiratory Journal 60 (4), 2022 | 57 | 2022 |
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis DAC Yang Yang, Timothy M Walker, A Sarah Walker, Daniel J Wilson, Timothy E ... Bioinformatics, 1-10, 2019 | 52* | 2019 |
Genome-wide association studies of global Mycobacterium tuberculosis resistance to 13 antimicrobials in 10,228 genomes identify new resistance mechanisms PLoS Biology 20 (8), 2022 | 51* | 2022 |
Darwin series: Domain specific large language models for natural science T Xie, Y Wan, W Huang, Z Yin, Y Liu, S Wang, Q Linghu, C Kit, C Grazian, ... arXiv preprint arXiv:2308.13565, 2023 | 38 | 2023 |
GenomegaMap: within-species genome-wide d_N/d_S estimation from over 10,000 genomes Molecular Biology and Evolution, 2020 | 35 | 2020 |
GenomegaMap: within-species genome-wide d_N/d_S estimation from over 10,000 genomes Molecular Biology and Evolution, 2020 | 35* | 2020 |
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis L Sonnenkalb, JJ Carter, A Spitaleri, Z Iqbal, M Hunt, KM Malone, ... The Lancet Microbe 4 (5), e358-e368, 2023 | 32 | 2023 |
A review of approximate Bayesian computation methods via density estimation: Inference for simulator‐models C Grazian, Y Fan Wiley Interdisciplinary Reviews: Computational Statistics 12 (4), e1486, 2020 | 30 | 2020 |
Approximating the Likelihood in ABC CC Drovandi, C Grazian, K Mengersen, C Robert Handbook of approximate bayesian computation, 321-368, 2018 | 26 | 2018 |
Jeffreys priors for mixture estimation: properties and alternatives C Grazian, CP Robert Computational Statistics & Data Analysis 121, 149-163, 2018 | 25 | 2018 |
Approximate Bayesian inference in semiparametric copula models C Grazian, B Liseo | 25 | 2017 |
Minos: variant adjudication and joint genotyping of cohorts of bacterial genomes Z Hunt, M., Letcher, B., Malone, K. M., Nguyen, G., Hall, M. B., Colquhoun ... Genome Biology 23 (1), 1-23, 2022 | 22* | 2022 |
Large language models as master key: unlocking the secrets of materials science with GPT T Xie, Y Wan, W Huang, Y Zhou, Y Liu, Q Linghu, S Wang, C Kit, ... arXiv preprint arXiv:2304.02213, 2023 | 21 | 2023 |
A crowd of BashTheBug volunteers reproducibly and accurately measure the minimum inhibitory concentrations of 13 antitubercular drugs from photographs of 96-well broth … CC Fowler, P. W., Wright, C., Spiers, H., Zhu, T., Baeten, E. M., Hoosdally ... Elife 11 (e75046), 2022 | 16 | 2022 |