Mathieu Almeida
Mathieu Almeida
Research Fellow at INRA MetaGenoPolis, France
Adresse e-mail validée de
Citée par
Citée par
Enterotypes of the human gut microbiome.
DJ Arumugam M, Raes J, Pelletier E, Le Paslier D, ...
Nature 473 (7346), 174-180, 2011
A metagenome-wide association study of gut microbiota in type 2 diabetes
J Qin, Y Li, Z Cai, S Li, J Zhu, F Zhang, S Liang, W Zhang, Y Guan, ...
Nature, 2012
Richness of human gut microbiome correlates with metabolic markers
E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ...
Nature 500 (7464), 541-546, 2013
Dietary intervention impact on gut microbial gene richness
A Cotillard, SP Kennedy, LC Kong, E Prifti, N Pons, E Le Chatelier, ...
Nature 500 (7464), 585-588, 2013
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ...
Nature 528 (7581), 262, 2015
Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology
MC Dao, A Everard, J Aron-Wisnewsky, N Sokolovska, E Prifti, EO Verger, ...
Gut 65 (3), 426-436, 2016
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ...
Nature biotechnology 32 (8), 822-828, 2014
Microbial ecology perturbation in human IgA deficiency
J Fadlallah, H El Kafsi, D Sterlin, C Juste, C Parizot, K Dorgham, G Autaa, ...
Science translational medicine 10 (439), 2018
Construction of a dairy microbial genome catalog opens new perspectives for the metagenomic analysis of dairy fermented products
M Almeida, A Hébert, AL Abraham, S Rasmussen, C Monnet, N Pons, ...
BMC genomics 15 (1), 1-16, 2014
Complete genome sequence of the pigmented Streptococcus thermophilus strain JIM8232
C Delorme, C Bartholini, M Luraschi, N Pons, V Loux, M Almeida, ...
Journal of bacteriology 193 (19), 5581-5582, 2011
MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data
F Plaza Oñate, E Le Chatelier, M Almeida, ACL Cervino, F Gauthier, ...
Bioinformatics 35 (9), 1544-1552, 2019
Genetic Characterization of Vibrio cholerae O1 isolates from outbreaks between 2011 and 2015 in Tanzania
Y Kachwamba, AA Mohammed, H Lukupulo, L Urio, M Majigo, F Mosha, ...
BMC infectious diseases 17 (1), 1-6, 2017
Complete genome sequence of the commensal Streptococcus salivarius strain JIM8777
E Guédon, C Delorme, N Pons, C Cruaud, V Loux, A Couloux, C Gautier, ...
Journal of bacteriology 193 (18), 5024-5025, 2011
Minimal genetic change in Vibrio cholerae in Mozambique over time: Multilocus variable number tandem repeat analysis and whole genome sequencing
M Garrine, I Mandomando, D Vubil, T Nhampossa, S Acacio, S Li, ...
PLoS neglected tropical diseases 11 (6), e0005671, 2017
Direct detection of Shigella in stool specimens by use of a metagenomic approach
J Liu, M Almeida, F Kabir, S Shakoor, S Qureshi, A Zaidi, S Li, ...
Journal of clinical microbiology 56 (2), 2018
Molecular characterization of Vibrio cholerae responsible for cholera epidemics in Uganda by PCR, MLVA and WGS
G Bwire, DA Sack, M Almeida, S Li, JB Voeglein, AK Debes, A Kagirita, ...
PLoS neglected tropical diseases 12 (6), e0006492, 2018
Metagenomics for Microbiology: High Throughput Sequencing as a Tool for Exploring the Human Microbiome
J Izard, M Rivera
Academic Press, 2014
Complete genome sequence of the clinical Streptococcus salivarius strain CCHSS3
C Delorme, E Guédon, N Pons, C Cruaud, A Couloux, V Loux, ...
Journal of bacteriology 193 (18), 5041-5042, 2011
Capturing the most wanted taxa through cross-sample correlations
M Almeida, M Pop, E Le Chatelier, E Prifti, N Pons, A Ghozlane, ...
The ISME journal 10 (10), 2459-2467, 2016
Comparison of inferred relatedness based on multilocus variable-number tandem-repeat analysis and whole genome sequencing of Vibrio cholerae O1
M Rashid, M Almeida, AS Azman, BR Lindsay, DA Sack, RR Colwell, ...
FEMS microbiology letters 363 (12), 2016
Le système ne peut pas réaliser cette opération maintenant. Veuillez réessayer plus tard.
Articles 1–20