| The structure of the BfrB–Bfd complex reveals protein–protein interactions enabling iron release from bacterioferritin H Yao, Y Wang, S Lovell, R Kumar, AM Ruvinsky, KP Battaile, IA Vakser, ... Journal of the American Chemical Society 134 (32), 13470-13481, 2012 | 94 | 2012 |
| Magnetoexciton absorption in coupled quantum wells YE Lozovik, AM Ruvinskii Journal of Experimental and Theoretical Physics 85 (5), 979-988, 1997 | 79 | 1997 |
| Role of binding entropy in the refinement of protein–ligand docking predictions: analysis based on the use of 11 scoring functions AM Ruvinsky Journal of Computational Chemistry 28 (8), 1364-1372, 2007 | 67 | 2007 |
| Deciphering cryptic binding sites on proteins by mixed-solvent molecular dynamics SR Kimura, HP Hu, AM Ruvinsky, W Sherman, AD Favia Journal of chemical information and modeling 57 (6), 1388-1401, 2017 | 64 | 2017 |
| Magnetoexcitons in coupled quantum wells YE Lozovik, AM Ruvinsky Physics Letters A 227 (3-4), 271-284, 1997 | 64 | 1997 |
| New and fast statistical‐thermodynamic method for computation of protein‐ligand binding entropy substantially improves docking accuracy AM Ruvinsky, AV Kozintsev Journal of computational chemistry 26 (11), 1089-1095, 2005 | 52 | 2005 |
| Structure fluctuations and conformational changes in protein binding AM Ruvinsky, T Kirys, AV Tuzikov, IA Vakser Journal of bioinformatics and computational biology 10 (02), 1241002, 2012 | 41 | 2012 |
| Side-chain conformational changes upon protein–protein association AM Ruvinsky, T Kirys, AV Tuzikov, IA Vakser Journal of molecular biology 408 (2), 356-365, 2011 | 37 | 2011 |
| Calculations of protein-ligand binding entropy of relative and overall molecular motions AM Ruvinsky Journal of computer-aided molecular design 21, 361-370, 2007 | 29 | 2007 |
| Sequence composition and environment effects on residue fluctuations in protein structures AM Ruvinsky, IA Vakser The Journal of chemical physics 133 (15), 2010 | 26 | 2010 |
| Rotamer libraries and probabilities of transition between rotamers for the side chains in protein–protein binding T Kirys, AM Ruvinsky, AV Tuzikov, IA Vakser Proteins: Structure, Function, and Bioinformatics 80 (8), 2089-2098, 2012 | 25 | 2012 |
| Novel statistical‐thermodynamic methods to predict protein‐ligand binding positions using probability distribution functions AM Ruvinsky, AV Kozintsev Proteins: Structure, Function, and Bioinformatics 62 (1), 202-208, 2006 | 23 | 2006 |
| Interaction cutoff effect on ruggedness of protein–protein energy landscape AM Ruvinsky, IA Vakser Proteins: Structure, Function, and Bioinformatics 70 (4), 1498-1505, 2008 | 21 | 2008 |
| Simulated unbound structures for benchmarking of protein docking in the Dockground resource T Kirys, AM Ruvinsky, D Singla, AV Tuzikov, PJ Kundrotas, IA Vakser BMC bioinformatics 16, 1-6, 2015 | 18 | 2015 |
| Chasing funnels on protein-protein energy landscapes at different resolutions AM Ruvinsky, IA Vakser Biophysical journal 95 (5), 2150-2159, 2008 | 18 | 2008 |
| Structural insights lead to a negamycin analogue with improved antimicrobial activity against gram-negative pathogens DC McKinney, GS Basarab, AI Cocozaki, MA Foulk, MD Miller, ... ACS Medicinal Chemistry Letters 6 (8), 930-935, 2015 | 17 | 2015 |
| The key role of atom types, reference states, and interaction cutoff radii in the knowledge‐based method: New variational approach AM Ruvinsky, AV Kozintsev Proteins: Structure, Function, and Bioinformatics 58 (4), 845-851, 2005 | 16 | 2005 |
| Superfluidity of “dirty” excitons YE Lozovik, OL Berman, AM Ruvinskii Journal of Experimental and Theoretical Physics Letters 69, 616-622, 1999 | 15 | 1999 |
| Local packing modulates diversity of iron pathways and cooperative behavior in eukaryotic and prokaryotic ferritins AM Ruvinsky, IA Vakser, M Rivera The Journal of chemical physics 140 (11), 2014 | 13 | 2014 |
| Magnetoexciton light absorption in inhomogeneous quasi-two-dimensional systems YE Lozovik, AM Ruvinskii Journal of Experimental and Theoretical Physics 87, 788-795, 1998 | 11 | 1998 |
Lozovik Y.E.Institute of SpectroscopyAdresse e-mail validée de isan.troitsk.ru
