| Complex multi-enhancer contacts captured by genome architecture mapping RA Beagrie, A Scialdone, M Schueler, DCA Kraemer, M Chotalia, SQ Xie, ... Nature 543 (7646), 519-524, 2017 | 670 | 2017 |
| Complexity of chromatin folding is captured by the strings and binders switch model M Barbieri, M Chotalia, J Fraser, LM Lavitas, J Dostie, A Pombo, ... Proceedings of the National Academy of Sciences 109 (40), 16173-16178, 2012 | 562 | 2012 |
| Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ... Molecular systems biology 11 (12), 852, 2015 | 363 | 2015 |
| Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells M Barbieri, SQ Xie, E Torlai Triglia, AM Chiariello, S Bianco, I de Santiago, ... Nature structural & molecular biology 24 (6), 515-524, 2017 | 87 | 2017 |
| Enhancer–promoter contact formation requires RNAPII and antagonizes loop extrusion S Zhang, N Übelmesser, M Barbieri, A Papantonis Nature genetics 55 (5), 832-840, 2023 | 55 | 2023 |
| A polymer model explains the complexity of large-scale chromatin folding M Barbieri, J Fraser, LM Lavitas, M Chotalia, J Dostie, A Pombo, ... Nucleus 4 (4), 267-273, 2013 | 34 | 2013 |
| Conformation regulation of the X chromosome inactivation center: a model A Scialdone, I Cataudella, M Barbieri, A Prisco, M Nicodemi PLoS computational biology 7 (10), e1002229, 2011 | 32 | 2011 |
| A model of the large-scale organization of chromatin M Barbieri, M Chotalia, J Fraser, LM Lavitas, J Dostie, A Pombo, ... Biochemical Society Transactions 41 (2), 508-512, 2013 | 21 | 2013 |
| Consortium F, Semple CA, Dostie J, Pombo A, Nicodemi M. Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ... Mol Syst Biol 11 (12), 852, 2015 | 20 | 2015 |
| Polymer physics, scaling and heterogeneity in the spatial organisation of chromosomes in the cell nucleus M Barbieri, A Scialdone, A Gamba, A Pombo, M Nicodemi Soft Matter 9 (36), 8631-8635, 2013 | 20 | 2013 |
| Polymer models of chromatin organization M Barbieri, A Scialdone, A Piccolo, AM Chiariello, C di Lanno, A Prisco, ... Frontiers in genetics 4, 113, 2013 | 16 | 2013 |
| Inference of chromosome 3D structures from GAM data by a physics computational approach L Fiorillo, S Bianco, AM Chiariello, M Barbieri, A Esposito, ... Methods 181, 70-79, 2020 | 12 | 2020 |
| Polymer models of the organization of chromosomes in the nucleus of cells AM Chiariello, S Bianco, A Piccolo, C Annunziatella, M Barbieri, A Pombo, ... Modern Physics Letters B 29 (09), 1530003, 2015 | 9 | 2015 |
| Competition between transcription and loop extrusion modulates promoter and enhancer dynamics A Platania, C Erb, M Barbieri, B Molcrette, E Grandgirard, MA de Kort, ... BioRxiv, 2023 | 8 | 2023 |
| Mean-field theory of the symmetry breaking model for X chromosome inactivation A Scialdone, M Barbieri, D Pallotti, M Nicodemi Progress of Theoretical Physics Supplement 191, 40-45, 2011 | 4 | 2011 |
| Multiwavelength frequency modulated CW ladar: the effect of refractive index M Barbieri, DK Pallotti, M Siciliani de Cumis, L Santamaria Amato Photonics 7 (4), 90, 2020 | 2 | 2020 |
| Extreme structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs T Xie, A Danieli-Mackay, M Buccarelli, M Barbieri, I Papadionysiou, ... bioRxiv, 2023.04. 20.537702, 2023 | 1 | 2023 |
| A feasibility study for self-heterodyne earth satellite dual-comb spectroscopy L Santamaria, M Barbieri, D Pallotti, MS de Cumis Optical Sensors 2021 11772, 143-147, 2021 | 1 | 2021 |
| Competition between transcription and loop extrusion modulates promoter and enhancer dynamics T Sexton, A Platania, C Erb, M Barbieri, B Molcrette, E Grandgirard, ... Research Square, 2023 | | 2023 |
| Single photon detector for satellite Dual Comb Spectroscopy: a numerical study L Santamaria, M Barbieri, DK Pallotti, MS de Cumis 2021 IEEE 14th Workshop on Low Temperature Electronics (WOLTE), 1-3, 2021 | | 2021 |
Mario NicodemiProfessor of Theoretical Physics, Università di Napoli "Federico II"Verified email at na.infn.it
