| Antimicrobial resistance in Mycobacterium tuberculosis: mechanistic and evolutionary perspectives SM Gygli, S Borrell, A Trauner, S Gagneux FEMS microbiology reviews 41 (3), 354-373, 2017 | 414 | 2017 |
| Acquired resistance to bedaquiline and delamanid in therapy for tuberculosis GV Bloemberg, PM Keller, D Stucki, A Trauner, S Borrell, T Latshang, ... New England Journal of Medicine 373 (20), 1986-1988, 2015 | 371 | 2015 |
| Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages D Stucki, D Brites, L Jeljeli, M Coscolla, Q Liu, A Trauner, L Fenner, ... Nature genetics 48 (12), 1535-1543, 2016 | 364 | 2016 |
| Tryptophan biosynthesis protects mycobacteria from CD4 T-cell-mediated killing YJ Zhang, MC Reddy, TR Ioerger, AC Rothchild, V Dartois, BM Schuster, ... Cell 155 (6), 1296-1308, 2013 | 334 | 2013 |
| Haloferax volcanii AglB and AglD are involved in N-glycosylation of the S-layer glycoprotein and proper assembly of the surface layer M Abu-Qarn, S Yurist-Doutsch, A Giordano, A Trauner, HR Morris, ... Journal of molecular biology 374 (5), 1224-1236, 2007 | 155 | 2007 |
| Evolution of drug resistance in tuberculosis: recent progress and implications for diagnosis and therapy A Trauner, S Borrell, K Reither, S Gagneux Drugs 74, 1063-1072, 2014 | 125 | 2014 |
| High-throughput metabolomic analysis predicts mode of action of uncharacterized antimicrobial compounds M Zampieri, B Szappanos, MV Buchieri, A Trauner, I Piazza, P Picotti, ... Science translational medicine 10 (429), eaal3973, 2018 | 117 | 2018 |
| Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity F Menardo, C Loiseau, D Brites, M Coscolla, SM Gygli, LK Rutaihwa, ... BMC bioinformatics 19, 1-8, 2018 | 109 | 2018 |
| The within-host population dynamics of Mycobacterium tuberculosis vary with treatment efficacy A Trauner, Q Liu, LE Via, X Liu, X Ruan, L Liang, H Shi, Y Chen, Z Wang, ... Genome biology 18, 1-17, 2017 | 101 | 2017 |
| The dormancy regulator DosR controls ribosome stability in hypoxic mycobacteria A Trauner, KEA Lougheed, MH Bennett, SM Hingley-Wilson, HD Williams Journal of Biological Chemistry 287 (28), 24053-24063, 2012 | 88 | 2012 |
| Identification of AglE, a Second Glycosyltransferase Involved in N Glycosylation of the Haloferax volcanii S-Layer Glycoprotein M Abu-Qarn, A Giordano, F Battaglia, A Trauner, PG Hitchen, HR Morris, ... Journal of bacteriology 190 (9), 3140-3146, 2008 | 79 | 2008 |
| Reference set of Mycobacterium tuberculosis clinical strains: A tool for research and product development S Borrell, A Trauner, D Brites, L Rigouts, C Loiseau, M Coscolla, ... PLoS one 14 (3), e0214088, 2019 | 64 | 2019 |
| Prisons as ecological drivers of fitness-compensated multidrug-resistant Mycobacterium tuberculosis SM Gygli, C Loiseau, L Jugheli, N Adamia, A Trauner, M Reinhard, ... Nature medicine 27 (7), 1171-1177, 2021 | 56 | 2021 |
| Transition bias influences the evolution of antibiotic resistance in Mycobacterium tuberculosis JL Payne, F Menardo, A Trauner, S Borrell, SM Gygli, C Loiseau, ... PLoS biology 17 (5), e3000265, 2019 | 55 | 2019 |
| Exploitation of a new flagellatropic phage of Erwinia for positive selection of bacterial mutants attenuated in plant virulence: towards phage therapy TJ Evans, A Trauner, E Komitopoulou, GPC Salmond Journal of Applied Microbiology 108 (2), 676-685, 2010 | 49 | 2010 |
| The Genetic Background Modulates the Evolution of Fluoroquinolone-Resistance in Mycobacterium tuberculosis RAD Castro, A Ross, L Kamwela, M Reinhard, C Loiseau, J Feldmann, ... Molecular biology and evolution 37 (1), 195-207, 2020 | 39 | 2020 |
| Isolation of bacterial ribosomes with monolith chromatography A Trauner, MH Bennett, HD Williams PLoS One 6 (2), e16273, 2011 | 36 | 2011 |
| Model-based integration of genomics and metabolomics reveals SNP functionality in Mycobacterium tuberculosis O Øyås, S Borrell, A Trauner, M Zimmermann, J Feldmann, T Liphardt, ... Proceedings of the National Academy of Sciences 117 (15), 8494-8502, 2020 | 33 | 2020 |
| A novel antibiotic class targeting the lipopolysaccharide transporter C Zampaloni, P Mattei, K Bleicher, L Winther, C Thäte, C Bucher, ... Nature, 1-6, 2024 | 15 | 2024 |
| The relative transmission fitness of multidrug-resistant Mycobacterium tuberculosis in a drug resistance hotspot C Loiseau, EM Windels, SM Gygli, L Jugheli, N Maghradze, D Brites, ... Nature communications 14 (1), 1988, 2023 | 14 | 2023 |
