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Marouen Ben Guebila
Marouen Ben Guebila
Harvard T.H. Chan School of Public Health
Verified email at hsph.harvard.edu
Title
Cited by
Cited by
Year
Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v. 3.0
L Heirendt, S Arreckx, T Pfau, SN Mendoza, A Richelle, A Heinken, ...
Nature protocols, 1, 2019
10142019
Crowdsourced mapping of unexplored target space of kinase inhibitors
A Cichońska, B Ravikumar, RJ Allaway, F Wan, S Park, O Isayev, S Li, ...
Nature communications 12 (1), 3307, 2021
662021
GRAND: a database of gene regulatory network models across human conditions
M Ben Guebila, CM Lopes-Ramos, D Weighill, AR Sonawane, R Burkholz, ...
Nucleic Acids Research 50 (D1), D610-D621, 2022
442022
Toward a Generalizable Framework of Disturbance Ecology Through Crowdsourced Science
EB Graham, C Averill, B Bond-Lamberty, JE Knelman, S Krause, ...
Frontiers in Ecology and Evolution 9, 76, 2021
432021
Model-based dietary optimization for late-stage, levodopa-treated, Parkinson’s disease patients
MB Guebila, I Thiele
NPJ systems biology and applications 2 (1), 1-8, 2016
432016
Pathogenesis, symptomatology, and transmission of SARS-CoV-2 through analysis of viral genomics and structure
HM Rando, AL MacLean, AJ Lee, R Lordan, S Ray, V Bansal, AN Skelly, ...
Msystems 6 (5), e00095-21, 2021
352021
Predicting gastrointestinal drug effects using contextualized metabolic models
M Ben Guebila, I Thiele
PLoS computational biology 15 (6), e1007100, 2019
232019
Identification and Development of Therapeutics for COVID-19
HM Rando, N Wellhausen, S Ghosh, AJ Lee, AA Dattoli, F Hu, JB Byrd, ...
Msystems 6 (6), e00233-21, 2021
202021
Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data
J Tanevski, T Nguyen, B Truong, N Karaiskos, ME Ahsen, X Zhang, C Shu, ...
Life science alliance 3 (11), 2020
202020
Gene regulatory network inference as relaxed graph matching
D Weighill, MB Guebila, C Lopes-Ramos, K Glass, J Quackenbush, ...
Proceedings of the AAAI Conference on Artificial Intelligence 35 (11), 10263 …, 2021
172021
Regulatory network of PD1 signaling is associated with prognosis in glioblastoma multiforme
CM Lopes-Ramos, T Belova, TH Brunner, MB Guebila, D Osorio, ...
Cancer Research 81 (21), 5401-5412, 2021
162021
Gene targeting in disease networks
D Weighill, M Ben Guebila, K Glass, J Platig, JJ Yeh, J Quackenbush
Frontiers in Genetics 12, 501, 2021
142021
DRAGON: determining regulatory associations using graphical models on multi-omic networks
KH Shutta, D Weighill, R Burkholz, MB Guebila, DL DeMeo, HU Zacharias, ...
Nucleic Acids Research 51 (3), e15-e15, 2023
13*2023
Predicting genotype-specific gene regulatory networks
D Weighill, MB Guebila, K Glass, J Quackenbush, J Platig
Genome Research 32 (3), 524-533, 2022
132022
Global network of computational biology communities: ISCB's Regional Student Groups breaking barriers
S Shome, RG Parra, N Fatima, AM Monzon, B Cuypers, Y Moosa, ...
F1000Research 8, 2019
122019
SARS-CoV-2 and COVID-19: An evolving review of diagnostics and therapeutics
HM Rando, CS Greene, MP Robson, SM Boca, N Wellhausen, R Lordan, ...
Manubot, 2021
112021
Dynamic flux balance analysis of whole-body metabolism for type 1 diabetes
M Ben Guebila, I Thiele
Nature Computational Science 1 (5), 348-361, 2021
102021
The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks
M Ben Guebila, T Wang, CM Lopes-Ramos, V Fanfani, D Weighill, ...
Genome Biology 24 (1), 1-23, 2023
9*2023
Pharmacy
DL Gal, T Wuliji, LK Matowe, MB Guebila, R Mitura
Essential Clinical Global Health, 427, 2014
72014
An online notebook resource for reproducible inference, analysis and publication of gene regulatory networks
M Ben Guebila, D Weighill, CM Lopes-Ramos, R Burkholz, RT Pop, ...
Nature Methods 19 (5), 511-513, 2022
62022
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Articles 1–20