Bertrand Néron
Bertrand Néron
Research Software Engineer
Adresse e-mail validée de pasteur.fr - Page d'accueil
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Mobyle: a new full web bioinformatics framework
B Néron, H Ménager, C Maufrais, N Joly, J Maupetit, S Letort, S Carrere, ...
Bioinformatics 25 (22), 3005-3011, 2009
3522009
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
D Couvin, A Bernheim, C Toffano-Nioche, M Touchon, J Michalik, ...
Nucleic acids research 46 (W1), W246-W251, 2018
3162018
Identification of protein secretion systems in bacterial genomes
SS Abby, J Cury, J Guglielmini, B Néron, M Touchon, EPC Rocha
Scientific reports 6 (1), 1-14, 2016
2102016
Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion
J Guglielmini, B Néron, SS Abby, MP Garcillán-Barcia, F la Cruz, ...
Nucleic acids research 42 (9), 5715-5727, 2014
1472014
MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systems
SS Abby, B Néron, H Ménager, M Touchon, EPC Rocha
PloS one 9 (10), e110726, 2014
1382014
Identification and analysis of integrons and cassette arrays in bacterial genomes
J Cury, T Jové, M Touchon, B Néron, EPC Rocha
Nucleic acids research 44 (10), 4539-4550, 2016
1342016
Activated MAPK/ERK kinase (MEK-1) induces transdifferentiation of pigmented epithelium into neural retina
A Galy, B Néron, N Planque, S Saule, A Eychène
Developmental biology 248 (2), 251-264, 2002
962002
Abundance and co-occurrence of extracellular capsules increase environmental breadth: Implications for the emergence of pathogens
O Rendueles, M Garcia-Garcerà, B Néron, M Touchon, EPC Rocha
PLoS pathogens 13 (7), e1006525, 2017
342017
Retinal dysplasia in mice lacking p56 lck
B Omri, C Blancher, B Neron, MC Marty, J Rutin, TJ Molina, B Pessac, ...
Oncogene 16 (18), 2351-2356, 1998
331998
Identification of protein secretion systems in bacterial genomes. Sci Rep 6: 23080
SS Abby, J Cury, J Guglielmini, B Néron, M Touchon, EP Rocha
252016
Antisense transcriptional interference mediates condition-specific gene repression in budding yeast
A Nevers, A Doyen, C Malabat, B Néron, T Kergrohen, A Jacquier, ...
Nucleic acids research 46 (12), 6009-6025, 2018
162018
Cloning and characterization of a novel transcription factor involved in cellular proliferation arrest: PATF
P Crisanti, G Raguenez, C Blancher, B Neron, A Mamoune, B Omri
Oncogene 20 (39), 5475-5483, 2001
132001
Mobyle: a Web portal framework for bioinformatics analyses
B Néron, P Tufféry, C Letondal
Network Tools and Applications in Biology (poster), Naples, Italy, 2005
82005
Identifying Conjugative Plasmids and Integrative Conjugative Elements with CONJscan
J Cury, SS Abby, O Doppelt-Azeroual, B Néron, EPC Rocha
Horizontal Gene Transfer, 265-283, 2020
72020
Bioinformatics applications discovery and composition with the mobyle suite and mobylenet
H Ménager, V Gopalan, B Néron, S Larroudé, J Maupetit, A Saladin, ...
International Workshop on Resource Discovery, 11-22, 2010
52010
BioWorkFlow: Web Services toolkit and workflow applications evaluation to deploy a confidence network
M Wessner, M Senger, F Samson, P Picouet, F Moreews, H Ménager, ...
Jobim (Journées Ouvertes Biologie Informatique Mathématiques), 2008
32008
Role of QN1 protein in cell proliferation arrest and differentiation during the neuroretina development
B Néron, M Marx, P Crisanti
Mechanisms of development 102 (1-2), 107-117, 2001
32001
Automatic and accurate identification of integrons and cassette arrays in bacterial genomes reveals unexpected patterns
J Cury, T Jové, M Touchon, B Néron, EPC Rocha
bioRxiv, 030866, 2015
12015
Bioconvert: a collaborative bioinformatics format converter library
T Cokelaer, A Biton, B Brancotte, Y Dufresne, KH Hillion, E Kornobis, ...
F1000Research 7, 2018
2018
Identifying molecular systems in protein sequence data
SS Abby, BJ Neron, E Rocha, M Touchon, H Menager
US Patent App. 14/606,741, 2016
2016
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