Paul Bastide
Paul Bastide
Verified email at umontpellier.fr - Homepage
Title
Cited by
Cited by
Year
PhyloNetworks: a package for phylogenetic networks
C Solís-Lemus, P Bastide, C Ané
Molecular biology and evolution 34 (12), 3292-3298, 2017
822017
Inference of adaptive shifts for multivariate correlated traits
P Bastide, C Ané, S Robin, M Mariadassou
Systematic Biology 67 (4), 662-680, 2018
422018
Phylogenetic comparative methods on phylogenetic networks with reticulations
P Bastide, C Solís-Lemus, R Kriebel, K William Sparks, C Ané
Systematic biology 67 (5), 800-820, 2018
352018
Detection of adaptive shifts on phylogenies using shifted stochastic processes on a tree
P Bastide, M Mariadassou, S Robin
Journal of the Royal Statistical Society: Series B (Statistical Methodology …, 2017
252017
Multiple factors behind early diversification of skull morphology in the continental radiation of New World monkeys
L Aristide, P Bastide, SF dos Reis, TM Pires dos Santos, RT Lopes, ...
Evolution 72 (12), 2697-2711, 2018
62018
nosoi: a stochastic agent‐based transmission chain simulation framework in R
S Lequime, P Bastide, S Dellicour, P Lemey, G Baele
Methods in Ecology and Evolution, 2020
42020
Shifted stochastic processes evolving on trees: application to models of adaptive evolution on phylogenies.
P Bastide
22017
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ...
Nature communications 11 (1), 1-11, 2020
12020
Efficient Bayesian Inference of General Gaussian Models on Large Phylogenetic Trees
P Bastide, LST Ho, G Baele, P Lemey, MA Suchard
arXiv preprint arXiv:2003.10336, 2020
12020
Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing
S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ...
BioRxiv, 788059, 2019
12019
Markov-modulated continuous-time Markov chains to identify site-and branch-specific evolutionary variation in BEAST
G Baele, MS Gill, P Bastide, P Lemey, MA Suchard
Systematic biology 70 (1), 181-189, 2021
2021
Large-scale inference of correlation among mixed-type biological traits with Phylogenetic multivariate probit models
Z Zhang, A Nishimura, P Bastide, X Ji, RP Payne, P Goulder, P Lemey, ...
arXiv preprint arXiv:1912.09185, 2019
2019
A Flexible Bayesian Framework to Study Viral Trait Evolution
P Bastide, G Baele, M Suchard, P Lemey
Joint Statistical Meetings 2019, Date: 2019/07/27-2019/08/01, Location …, 2019
2019
Un cadre d’inférence bayésien pour l’étude de l’évolution de traits quantitatifs viraux
P Bastide, G Baele, M Suchard, P Lemey
51es Journées de Statistique 2019, Date: 2019/06/03-2019/06/07, Location …, 2019
2019
NOSOI: TRANSMISSION CHAIN SIMULATOR IMPLEMENTING WITHIN-HOST DYNAMICS TO LEVERAGE VECTOR COMPETENCE DATA
S Lequime, P Bastide, S Dellicour, A Fontaine, G Baele, P Lemey
AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE 101, 240-240, 2019
2019
Corrigendum to:“Phylogenetic Comparative Methods on Phylogenetic Networks with Reticulations”
P Bastide, C Solís-Lemus, R Kriebel, KW Sparks, C Ané
Syst. Biol 68 (6), 1063, 2019
2019
Modèles de processus stochastiques avec sauts sur arbres: application à l'évolution adaptative sur des phylogénies.
P Bastide
Paris Saclay, 2017
2017
Tests of Phylogenetic Signal on Networks
C Ané, P Bastide, M Mariadassou, S Robin, C Solıs-Lemus
2017
Processus d’évolution réticulée: tests de signal phylogénétique
C Ané, P Bastide, M Mariadassou, S Robin, C Solıs-Lemus
Processus avec sauts sur arbres: détection de changements adaptatifs
P Bastide, S Robin, M Mariadassou
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Articles 1–20