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Paul Bastide
Paul Bastide
Verified email at umontpellier.fr - Homepage
Title
Cited by
Cited by
Year
PhyloNetworks: a package for phylogenetic networks
C Solís-Lemus, P Bastide, C Ané
Molecular biology and evolution 34 (12), 3292-3298, 2017
1592017
Phylogenetic comparative methods on phylogenetic networks with reticulations
P Bastide, C Solís-Lemus, R Kriebel, K William Sparks, C Ané
Systematic biology 67 (5), 800-820, 2018
602018
Inference of adaptive shifts for multivariate correlated traits
P Bastide, C Ané, S Robin, M Mariadassou
Systematic Biology 67 (4), 662-680, 2018
592018
Detection of adaptive shifts on phylogenies using shifted stochastic processes on a tree
P Bastide, M Mariadassou, S Robin
Journal of the Royal Statistical Society: Series B (Statistical Methodology …, 2017
332017
nosoi: A stochastic agent‐based transmission chain simulation framework in r
S Lequime, P Bastide, S Dellicour, P Lemey, G Baele
Methods in ecology and evolution 11 (8), 1002-1007, 2020
142020
Large-scale inference of correlation among mixed-type biological traits with phylogenetic multivariate probit models
Z Zhang, A Nishimura, P Bastide, X Ji, RP Payne, P Goulder, P Lemey, ...
The Annals of Applied Statistics 15 (1), 230-251, 2021
122021
Multiple factors behind early diversification of skull morphology in the continental radiation of New World monkeys
L Aristide, P Bastide, SF Dos Reis, TM Pires dos Santos, RT Lopes, ...
Evolution 72 (12), 2697-2711, 2018
112018
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ...
Nature communications 11 (1), 1-11, 2020
102020
Markov-modulated continuous-time Markov chains to identify site-and branch-specific evolutionary variation in BEAST
G Baele, MS Gill, P Bastide, P Lemey, MA Suchard
Systematic biology 70 (1), 181-189, 2021
62021
Efficient Bayesian inference of general Gaussian models on large phylogenetic trees
P Bastide, LST Ho, G Baele, P Lemey, MA Suchard
arXiv preprint arXiv:2003.10336, 2020
42020
Shifted stochastic processes evolving on trees: application to models of adaptive evolution on phylogenies.
P Bastide
Université Paris Saclay (COmUE), 2017
32017
Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing
S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ...
bioRxiv, 788059, 2020
22020
Accounting for intraspecific variation in continuous trait evolution on a reticulate phylogeny
BS Teo, J Rose, P Bastide, C Ane
bioRxiv, 2022
2022
Benchmark of Differential Gene Expression Analysis Methods for Inter-species RNA-Seq Data using a Phylogenetic Simulation Framework
P Bastide, C Soneson, O Lespinet, M Gallopin
bioRxiv, 2022
2022
Bayesian Methods for Trait Evolution
P Bastide
2021
Stochastic processes on trees: Brownian motion and beyond
P Bastide, MD Felipe
2021
The Phylogenetic Regression
P Bastide
2021
Phylogenetic comparative methods on species networks
P Bastide, C Solís-Lemus, R Kriebel, K Sparks, C Ané
2021 Fall Western Sectional Meeting, 2021
2021
Rivers and landscape ecology of a plant virus, Rice yellow mottle virus along the Niger Valley
S Issaka, O Traoré, RDS Longué, A Pinel-Galzi, MS Gill, S Dellicour, ...
Virus Evolution 7 (2), veab072, 2021
2021
Software for Systematics and Evolution
GUY BAELE, MS GILL, P BASTIDE, P LEMEY, MA SUCHARD
Syst. Biol 70 (1), 181-189, 2021
2021
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